Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
VRK2Q86Y07 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VRK2Q86Y07 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
VRK2Q86Y07 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.84□□□□□ -0.03
VRK2Q86Y07 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.84□□□□□ -0.03
VRK2Q86Y07 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
VRK2Q86Y07 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.84□□□□□ -0.03
VRK2Q86Y07 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VRK2Q86Y07 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
VRK2Q86Y07 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VRK2Q86Y07 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VRK2Q86Y07 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.84□□□□□ -0.03
VRK2Q86Y07 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VRK2Q86Y07 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
VRK2Q86Y07 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VRK2Q86Y07 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
VRK2Q86Y07 AL691432.1-201ENST00000596308 1422 ntBASIC14.83□□□□□ -0.03
VRK2Q86Y07 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
VRK2Q86Y07 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
VRK2Q86Y07 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
VRK2Q86Y07 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VRK2Q86Y07 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
VRK2Q86Y07 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
VRK2Q86Y07 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VRK2Q86Y07 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VRK2Q86Y07 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.83□□□□□ -0.04
VRK2Q86Y07 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.83□□□□□ -0.04
VRK2Q86Y07 AC020658.6-201ENST00000623564 1870 ntBASIC14.83□□□□□ -0.04
VRK2Q86Y07 BNIP3P1-202ENST00000550043 1585 ntBASIC14.83□□□□□ -0.04
VRK2Q86Y07 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VRK2Q86Y07 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
VRK2Q86Y07 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VRK2Q86Y07 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
VRK2Q86Y07 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
VRK2Q86Y07 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VRK2Q86Y07 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
VRK2Q86Y07 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VRK2Q86Y07 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VRK2Q86Y07 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.83□□□□□ -0.04
VRK2Q86Y07 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.83□□□□□ -0.04
VRK2Q86Y07 TIMM8BP1-201ENST00000452384 211 ntBASIC14.83□□□□□ -0.04
VRK2Q86Y07 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.83□□□□□ -0.04
VRK2Q86Y07 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.83□□□□□ -0.04
VRK2Q86Y07 AP000842.3-202ENST00000569238 1080 ntBASIC14.83□□□□□ -0.04
VRK2Q86Y07 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.83□□□□□ -0.04
VRK2Q86Y07 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.83□□□□□ -0.04
VRK2Q86Y07 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.83□□□□□ -0.04
VRK2Q86Y07 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VRK2Q86Y07 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
VRK2Q86Y07 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.83□□□□□ -0.04
VRK2Q86Y07 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VRK2Q86Y07 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
VRK2Q86Y07 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
VRK2Q86Y07 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VRK2Q86Y07 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
VRK2Q86Y07 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VRK2Q86Y07 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
VRK2Q86Y07 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.83□□□□□ -0.04
VRK2Q86Y07 AC092127.1-201ENST00000567093 3455 ntBASIC14.83□□□□□ -0.04
VRK2Q86Y07 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VRK2Q86Y07 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VRK2Q86Y07 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VRK2Q86Y07 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
VRK2Q86Y07 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.83□□□□□ -0.04
VRK2Q86Y07 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VRK2Q86Y07 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VRK2Q86Y07 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VRK2Q86Y07 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VRK2Q86Y07 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VRK2Q86Y07 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VRK2Q86Y07 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VRK2Q86Y07 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.82□□□□□ -0.04
VRK2Q86Y07 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
VRK2Q86Y07 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
VRK2Q86Y07 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VRK2Q86Y07 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
VRK2Q86Y07 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
VRK2Q86Y07 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VRK2Q86Y07 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.82□□□□□ -0.04
VRK2Q86Y07 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
VRK2Q86Y07 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
VRK2Q86Y07 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
VRK2Q86Y07 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VRK2Q86Y07 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VRK2Q86Y07 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
VRK2Q86Y07 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
VRK2Q86Y07 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.82□□□□□ -0.04
VRK2Q86Y07 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.82□□□□□ -0.04
VRK2Q86Y07 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.82□□□□□ -0.04
VRK2Q86Y07 AC243562.2-201ENST00000561247 970 ntBASIC14.82□□□□□ -0.04
VRK2Q86Y07 LINC01225-203ENST00000563550 1244 ntBASIC14.82□□□□□ -0.04
VRK2Q86Y07 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.82□□□□□ -0.04
VRK2Q86Y07 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
VRK2Q86Y07 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VRK2Q86Y07 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.82□□□□□ -0.04
VRK2Q86Y07 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.82□□□□□ -0.04
VRK2Q86Y07 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
VRK2Q86Y07 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
VRK2Q86Y07 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VRK2Q86Y07 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms