Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 AL139400.1-201ENST00000366220 510 ntBASIC14.79□□□□□ -0.04
ZNF550Q7Z398 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 ADH5P3-201ENST00000433842 1137 ntBASIC14.79□□□□□ -0.04
ZNF550Q7Z398 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.79□□□□□ -0.04
ZNF550Q7Z398 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 AC243562.2-201ENST00000561247 970 ntBASIC14.79□□□□□ -0.04
ZNF550Q7Z398 AC004449.1-201ENST00000564240 433 ntBASIC14.79□□□□□ -0.04
ZNF550Q7Z398 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 AC061975.2-201ENST00000581722 295 ntBASIC14.79□□□□□ -0.04
ZNF550Q7Z398 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 AL162727.3-201ENST00000635661 2787 ntBASIC14.79□□□□□ -0.04
ZNF550Q7Z398 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF550Q7Z398 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 AC126755.1-201ENST00000525846 6405 ntBASIC14.78□□□□□ -0.04
ZNF550Q7Z398 FAM220BP-201ENST00000377689 816 ntBASIC14.78□□□□□ -0.04
ZNF550Q7Z398 AC142381.1-201ENST00000426099 345 ntBASIC14.78□□□□□ -0.04
ZNF550Q7Z398 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 RNA5SP410-201ENST00000516285 106 ntBASIC14.78□□□□□ -0.04
ZNF550Q7Z398 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 AC243562.1-201ENST00000560672 389 ntBASIC14.78□□□□□ -0.04
ZNF550Q7Z398 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms