Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHFQ7M4L6 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.55□□□□□ -0.08
SHFQ7M4L6 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.55□□□□□ -0.08
SHFQ7M4L6 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SHFQ7M4L6 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
SHFQ7M4L6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SHFQ7M4L6 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHFQ7M4L6 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.54□□□□□ -0.08
SHFQ7M4L6 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHFQ7M4L6 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.54□□□□□ -0.08
SHFQ7M4L6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHFQ7M4L6 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.54□□□□□ -0.08
SHFQ7M4L6 AC092127.1-201ENST00000567093 3455 ntBASIC14.54□□□□□ -0.08
SHFQ7M4L6 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHFQ7M4L6 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHFQ7M4L6 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHFQ7M4L6 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.54□□□□□ -0.08
SHFQ7M4L6 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHFQ7M4L6 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.54□□□□□ -0.08
SHFQ7M4L6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SHFQ7M4L6 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHFQ7M4L6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHFQ7M4L6 RNU1-129P-201ENST00000384064 167 ntBASIC14.54□□□□□ -0.08
SHFQ7M4L6 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.54□□□□□ -0.08
SHFQ7M4L6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.54□□□□□ -0.08
SHFQ7M4L6 KRT18P56-201ENST00000507275 550 ntBASIC14.54□□□□□ -0.08
SHFQ7M4L6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.54□□□□□ -0.08
SHFQ7M4L6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.54□□□□□ -0.08
SHFQ7M4L6 AL031432.2-201ENST00000566714 459 ntBASIC14.54□□□□□ -0.08
SHFQ7M4L6 AL928711.1-201ENST00000570165 459 ntBASIC14.54□□□□□ -0.08
SHFQ7M4L6 OR7E47P-204ENST00000575924 449 ntBASIC14.54□□□□□ -0.08
SHFQ7M4L6 U1.21-201ENST00000580816 167 ntBASIC14.54□□□□□ -0.08
SHFQ7M4L6 ACTL9-202ENST00000612068 1252 ntBASIC14.54□□□□□ -0.08
SHFQ7M4L6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SHFQ7M4L6 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.54□□□□□ -0.08
SHFQ7M4L6 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHFQ7M4L6 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.54□□□□□ -0.08
SHFQ7M4L6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.54□□□□□ -0.08
SHFQ7M4L6 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHFQ7M4L6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SHFQ7M4L6 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHFQ7M4L6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
SHFQ7M4L6 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.54□□□□□ -0.08
SHFQ7M4L6 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHFQ7M4L6 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHFQ7M4L6 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SHFQ7M4L6 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHFQ7M4L6 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHFQ7M4L6 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHFQ7M4L6 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHFQ7M4L6 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHFQ7M4L6 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
SHFQ7M4L6 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHFQ7M4L6 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SHFQ7M4L6 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.53□□□□□ -0.08
SHFQ7M4L6 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHFQ7M4L6 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.53□□□□□ -0.08
SHFQ7M4L6 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHFQ7M4L6 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHFQ7M4L6 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SHFQ7M4L6 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHFQ7M4L6 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
SHFQ7M4L6 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHFQ7M4L6 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHFQ7M4L6 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.53□□□□□ -0.08
SHFQ7M4L6 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.53□□□□□ -0.08
SHFQ7M4L6 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHFQ7M4L6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHFQ7M4L6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.53□□□□□ -0.08
SHFQ7M4L6 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
SHFQ7M4L6 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
SHFQ7M4L6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHFQ7M4L6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHFQ7M4L6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.53□□□□□ -0.08
SHFQ7M4L6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.53□□□□□ -0.08
SHFQ7M4L6 HAUS4P1-201ENST00000406739 1145 ntBASIC14.53□□□□□ -0.08
SHFQ7M4L6 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.53□□□□□ -0.08
SHFQ7M4L6 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHFQ7M4L6 HNRNPDP1-201ENST00000439535 754 ntBASIC14.53□□□□□ -0.08
SHFQ7M4L6 UNC93B7-201ENST00000509439 705 ntBASIC14.53□□□□□ -0.08
SHFQ7M4L6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHFQ7M4L6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHFQ7M4L6 AC012640.2-201ENST00000561606 901 ntBASIC14.53□□□□□ -0.08
SHFQ7M4L6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHFQ7M4L6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
SHFQ7M4L6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHFQ7M4L6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHFQ7M4L6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.53□□□□□ -0.08
SHFQ7M4L6 AL031055.1-201ENST00000606362 631 ntBASIC14.53□□□□□ -0.08
SHFQ7M4L6 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHFQ7M4L6 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHFQ7M4L6 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.53□□□□□ -0.08
SHFQ7M4L6 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
SHFQ7M4L6 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHFQ7M4L6 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SHFQ7M4L6 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHFQ7M4L6 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHFQ7M4L6 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHFQ7M4L6 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHFQ7M4L6 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms