Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF549Q6P9A3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
ZNF549Q6P9A3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF549Q6P9A3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF549Q6P9A3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 RPSAP43-201ENST00000402237 625 ntBASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
ZNF549Q6P9A3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 HYMAI-201ENST00000635591 3347 ntBASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 RARRES2P9-201ENST00000565168 469 ntBASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 AC073347.1-201ENST00000421633 2643 ntBASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF549Q6P9A3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF549Q6P9A3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF549Q6P9A3 AC126177.1-201ENST00000547829 2218 ntBASIC15.88■□□□□ 0.13
ZNF549Q6P9A3 AC013268.4-201ENST00000637413 2228 ntBASIC15.88■□□□□ 0.13
ZNF549Q6P9A3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.88■□□□□ 0.13
ZNF549Q6P9A3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.88■□□□□ 0.13
ZNF549Q6P9A3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF549Q6P9A3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF549Q6P9A3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.88■□□□□ 0.13
ZNF549Q6P9A3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF549Q6P9A3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.88■□□□□ 0.13
ZNF549Q6P9A3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.88■□□□□ 0.13
ZNF549Q6P9A3 REXO1L1P-202ENST00000608646 1974 ntBASIC15.88■□□□□ 0.13
ZNF549Q6P9A3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF549Q6P9A3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
ZNF549Q6P9A3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF549Q6P9A3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF549Q6P9A3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF549Q6P9A3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF549Q6P9A3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
ZNF549Q6P9A3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms