Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 SPDYE12P-201ENST00000618416 771 ntBASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 AL162727.3-201ENST00000635661 2787 ntBASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.82■□□□□ 0.28
PTPN20Q4JDL3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN20Q4JDL3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPN20Q4JDL3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PTPN20Q4JDL3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN20Q4JDL3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PTPN20Q4JDL3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PTPN20Q4JDL3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PTPN20Q4JDL3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPN20Q4JDL3 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN20Q4JDL3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPN20Q4JDL3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.81■□□□□ 0.28
PTPN20Q4JDL3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.81■□□□□ 0.28
PTPN20Q4JDL3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPN20Q4JDL3 AC097359.3-201ENST00000603982 1210 ntBASIC16.81■□□□□ 0.28
PTPN20Q4JDL3 AL589739.1-201ENST00000607720 493 ntBASIC16.81■□□□□ 0.28
PTPN20Q4JDL3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PTPN20Q4JDL3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPN20Q4JDL3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN20Q4JDL3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PTPN20Q4JDL3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPN20Q4JDL3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN20Q4JDL3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PTPN20Q4JDL3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN20Q4JDL3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN20Q4JDL3 CETN4P-206ENST00000642099 2168 ntBASIC16.81■□□□□ 0.28
PTPN20Q4JDL3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.81■□□□□ 0.28
PTPN20Q4JDL3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPN20Q4JDL3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN20Q4JDL3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 AC092127.1-201ENST00000567093 3455 ntBASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 RPL37AP1-201ENST00000412502 279 ntBASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 KLF2P3-201ENST00000451977 1087 ntBASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN20Q4JDL3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
PTPN20Q4JDL3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PTPN20Q4JDL3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN20Q4JDL3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PTPN20Q4JDL3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.79■□□□□ 0.28
PTPN20Q4JDL3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN20Q4JDL3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
PTPN20Q4JDL3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN20Q4JDL3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms