Protein–RNA interactions for Protein: Q3SY46

KRTAP13-3, Keratin-associated protein 13-3, humanhuman

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP13-3Q3SY46 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 CALY-203ENST00000368558 825 ntTSL 5 BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 AC092580.3-201ENST00000430932 139 ntBASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 FHL2-212ENST00000607522 759 ntTSL 2 BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 AL031731.1-201ENST00000642131 2094 ntBASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 AL009178.2-201ENST00000597278 2719 ntBASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 GOLGA2P9-201ENST00000596977 1937 ntBASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP13-3Q3SY46 TCAF2P1-201ENST00000291129 2421 ntBASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 AC138035.3-201ENST00000622706 2791 ntBASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 HNRNPA1P40-201ENST00000426371 1278 ntBASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 AC241585.1-201ENST00000433527 519 ntBASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 AC093724.1-201ENST00000448659 1027 ntBASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 AL512638.1-201ENST00000457493 794 ntBASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 SATB1-217ENST00000493952 626 ntTSL 3 BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 RNA5SP410-201ENST00000516285 106 ntBASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 AL109954.1-202ENST00000564051 2148 ntBASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 SPDYE12P-201ENST00000618416 771 ntBASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC9.06□□□□□ -0.96
KRTAP13-3Q3SY46 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC9.06□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms