Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFX4Q33E94 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.96□□□□□ -0.01
RFX4Q33E94 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RFX4Q33E94 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RFX4Q33E94 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFX4Q33E94 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFX4Q33E94 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RFX4Q33E94 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
RFX4Q33E94 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RFX4Q33E94 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.96□□□□□ -0.01
RFX4Q33E94 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.96□□□□□ -0.01
RFX4Q33E94 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.96□□□□□ -0.01
RFX4Q33E94 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFX4Q33E94 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFX4Q33E94 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFX4Q33E94 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFX4Q33E94 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RFX4Q33E94 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFX4Q33E94 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RFX4Q33E94 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.96□□□□□ -0.01
RFX4Q33E94 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.96□□□□□ -0.01
RFX4Q33E94 AC245100.5-201ENST00000452108 331 ntBASIC14.96□□□□□ -0.01
RFX4Q33E94 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.96□□□□□ -0.01
RFX4Q33E94 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.96□□□□□ -0.01
RFX4Q33E94 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.96□□□□□ -0.01
RFX4Q33E94 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
RFX4Q33E94 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFX4Q33E94 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFX4Q33E94 AC013726.1-201ENST00000563747 2285 ntBASIC14.96□□□□□ -0.01
RFX4Q33E94 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
RFX4Q33E94 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RFX4Q33E94 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFX4Q33E94 AC026748.1-201ENST00000624349 3251 ntBASIC14.96□□□□□ -0.02
RFX4Q33E94 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
RFX4Q33E94 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RFX4Q33E94 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RFX4Q33E94 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RFX4Q33E94 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.96□□□□□ -0.02
RFX4Q33E94 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.96□□□□□ -0.02
RFX4Q33E94 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RFX4Q33E94 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFX4Q33E94 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFX4Q33E94 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFX4Q33E94 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFX4Q33E94 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RFX4Q33E94 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RFX4Q33E94 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFX4Q33E94 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RFX4Q33E94 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RFX4Q33E94 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFX4Q33E94 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.95□□□□□ -0.02
RFX4Q33E94 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFX4Q33E94 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.95□□□□□ -0.02
RFX4Q33E94 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFX4Q33E94 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.95□□□□□ -0.02
RFX4Q33E94 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.95□□□□□ -0.02
RFX4Q33E94 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFX4Q33E94 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.95□□□□□ -0.02
RFX4Q33E94 AC136632.2-201ENST00000512891 861 ntBASIC14.95□□□□□ -0.02
RFX4Q33E94 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.95□□□□□ -0.02
RFX4Q33E94 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.95□□□□□ -0.02
RFX4Q33E94 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.95□□□□□ -0.02
RFX4Q33E94 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.95□□□□□ -0.02
RFX4Q33E94 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.95□□□□□ -0.02
RFX4Q33E94 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.95□□□□□ -0.02
RFX4Q33E94 AC008667.4-201ENST00000607370 168 ntBASIC14.95□□□□□ -0.02
RFX4Q33E94 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.95□□□□□ -0.02
RFX4Q33E94 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.95□□□□□ -0.02
RFX4Q33E94 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RFX4Q33E94 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFX4Q33E94 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFX4Q33E94 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFX4Q33E94 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFX4Q33E94 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.95□□□□□ -0.02
RFX4Q33E94 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.95□□□□□ -0.02
RFX4Q33E94 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
RFX4Q33E94 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.95□□□□□ -0.02
RFX4Q33E94 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFX4Q33E94 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFX4Q33E94 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
RFX4Q33E94 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.95□□□□□ -0.02
RFX4Q33E94 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFX4Q33E94 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.95□□□□□ -0.02
RFX4Q33E94 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFX4Q33E94 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFX4Q33E94 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.94□□□□□ -0.02
RFX4Q33E94 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFX4Q33E94 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.94□□□□□ -0.02
RFX4Q33E94 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFX4Q33E94 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RFX4Q33E94 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFX4Q33E94 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.94□□□□□ -0.02
RFX4Q33E94 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RFX4Q33E94 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFX4Q33E94 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFX4Q33E94 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFX4Q33E94 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFX4Q33E94 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.94□□□□□ -0.02
RFX4Q33E94 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.94□□□□□ -0.02
RFX4Q33E94 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms