Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2B3Q16720 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.6■□□□□ 0.73
ATP2B3Q16720 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2B3Q16720 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2B3Q16720 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2B3Q16720 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
ATP2B3Q16720 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2B3Q16720 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2B3Q16720 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC19.6■□□□□ 0.73
ATP2B3Q16720 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2B3Q16720 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2B3Q16720 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2B3Q16720 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.59■□□□□ 0.73
ATP2B3Q16720 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2B3Q16720 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.59■□□□□ 0.73
ATP2B3Q16720 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2B3Q16720 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2B3Q16720 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2B3Q16720 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2B3Q16720 Z97205.2-201ENST00000564697 1639 ntBASIC19.59■□□□□ 0.73
ATP2B3Q16720 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2B3Q16720 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2B3Q16720 MTHFR-217ENST00000641820 1569 ntBASIC19.59■□□□□ 0.73
ATP2B3Q16720 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2B3Q16720 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
ATP2B3Q16720 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2B3Q16720 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2B3Q16720 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2B3Q16720 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.59■□□□□ 0.73
ATP2B3Q16720 DFFBP1-201ENST00000433250 979 ntBASIC19.59■□□□□ 0.73
ATP2B3Q16720 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.59■□□□□ 0.73
ATP2B3Q16720 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.59■□□□□ 0.73
ATP2B3Q16720 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
ATP2B3Q16720 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.59■□□□□ 0.73
ATP2B3Q16720 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2B3Q16720 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC19.59■□□□□ 0.73
ATP2B3Q16720 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC19.59■□□□□ 0.73
ATP2B3Q16720 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.59■□□□□ 0.73
ATP2B3Q16720 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2B3Q16720 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2B3Q16720 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.59■□□□□ 0.73
ATP2B3Q16720 AL596087.1-201ENST00000400979 1969 ntBASIC19.59■□□□□ 0.73
ATP2B3Q16720 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2B3Q16720 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.59■□□□□ 0.73
ATP2B3Q16720 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.59■□□□□ 0.73
ATP2B3Q16720 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2B3Q16720 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.58■□□□□ 0.73
ATP2B3Q16720 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.58■□□□□ 0.73
ATP2B3Q16720 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ATP2B3Q16720 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.58■□□□□ 0.73
ATP2B3Q16720 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.58■□□□□ 0.73
ATP2B3Q16720 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ATP2B3Q16720 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.58■□□□□ 0.73
ATP2B3Q16720 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ATP2B3Q16720 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.58■□□□□ 0.73
ATP2B3Q16720 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP2B3Q16720 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP2B3Q16720 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2B3Q16720 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2B3Q16720 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.58■□□□□ 0.72
ATP2B3Q16720 AL353779.1-201ENST00000434793 351 ntBASIC19.58■□□□□ 0.72
ATP2B3Q16720 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC19.58■□□□□ 0.72
ATP2B3Q16720 CD81-207ENST00000481687 890 ntTSL 2 BASIC19.58■□□□□ 0.72
ATP2B3Q16720 AC093004.1-201ENST00000508850 424 ntBASIC19.58■□□□□ 0.72
ATP2B3Q16720 FTH1-202ENST00000526640 786 ntTSL 2 BASIC19.58■□□□□ 0.72
ATP2B3Q16720 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC19.58■□□□□ 0.72
ATP2B3Q16720 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC19.58■□□□□ 0.72
ATP2B3Q16720 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.58■□□□□ 0.72
ATP2B3Q16720 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC19.58■□□□□ 0.72
ATP2B3Q16720 AC092337.1-201ENST00000568699 1129 ntBASIC19.58■□□□□ 0.72
ATP2B3Q16720 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.58■□□□□ 0.72
ATP2B3Q16720 AC012645.4-201ENST00000610691 1061 ntBASIC19.58■□□□□ 0.72
ATP2B3Q16720 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
ATP2B3Q16720 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.72
ATP2B3Q16720 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2B3Q16720 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2B3Q16720 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2B3Q16720 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2B3Q16720 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2B3Q16720 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
ATP2B3Q16720 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.72
ATP2B3Q16720 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2B3Q16720 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2B3Q16720 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2B3Q16720 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B3Q16720 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B3Q16720 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B3Q16720 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.57■□□□□ 0.72
ATP2B3Q16720 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B3Q16720 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.57■□□□□ 0.72
ATP2B3Q16720 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B3Q16720 REXO1L1P-202ENST00000608646 1974 ntBASIC19.57■□□□□ 0.72
ATP2B3Q16720 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
ATP2B3Q16720 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B3Q16720 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B3Q16720 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
ATP2B3Q16720 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
ATP2B3Q16720 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B3Q16720 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.57■□□□□ 0.72
ATP2B3Q16720 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms