Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42EP1Q00587 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.35■□□□□ 0.37
CDC42EP1Q00587 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.35■□□□□ 0.37
CDC42EP1Q00587 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42EP1Q00587 AL607033.1-201ENST00000623900 1599 ntBASIC17.35■□□□□ 0.37
CDC42EP1Q00587 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.35■□□□□ 0.37
CDC42EP1Q00587 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.35■□□□□ 0.37
CDC42EP1Q00587 CDC14C-201ENST00000428251 1719 ntBASIC17.35■□□□□ 0.37
CDC42EP1Q00587 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.35■□□□□ 0.37
CDC42EP1Q00587 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.35■□□□□ 0.37
CDC42EP1Q00587 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
CDC42EP1Q00587 PCDHA14-201ENST00000506751 2298 ntBASIC17.35■□□□□ 0.37
CDC42EP1Q00587 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42EP1Q00587 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 AL162726.2-201ENST00000438986 1017 ntBASIC17.34■□□□□ 0.37
CDC42EP1Q00587 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.34■□□□□ 0.37
CDC42EP1Q00587 GPR53P-205ENST00000457298 1084 ntBASIC17.34■□□□□ 0.37
CDC42EP1Q00587 KRT18P43-201ENST00000469825 1281 ntBASIC17.34■□□□□ 0.37
CDC42EP1Q00587 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 AC132938.2-201ENST00000579188 680 ntBASIC17.34■□□□□ 0.37
CDC42EP1Q00587 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 AL359881.2-201ENST00000602973 570 ntBASIC17.34■□□□□ 0.37
CDC42EP1Q00587 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 AL591163.1-201ENST00000641757 987 ntBASIC17.34■□□□□ 0.37
CDC42EP1Q00587 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42EP1Q00587 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDC42EP1Q00587 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDC42EP1Q00587 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDC42EP1Q00587 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.33■□□□□ 0.37
CDC42EP1Q00587 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.33■□□□□ 0.37
CDC42EP1Q00587 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDC42EP1Q00587 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.33■□□□□ 0.37
CDC42EP1Q00587 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDC42EP1Q00587 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.33■□□□□ 0.37
CDC42EP1Q00587 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.33■□□□□ 0.37
CDC42EP1Q00587 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
CDC42EP1Q00587 KRT8P22-201ENST00000562317 1415 ntBASIC17.33■□□□□ 0.36
CDC42EP1Q00587 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.33■□□□□ 0.36
CDC42EP1Q00587 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.33■□□□□ 0.36
CDC42EP1Q00587 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDC42EP1Q00587 AL133267.1-201ENST00000398220 340 ntBASIC17.33■□□□□ 0.36
CDC42EP1Q00587 AC134915.1-201ENST00000426461 574 ntBASIC17.33■□□□□ 0.36
CDC42EP1Q00587 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.33■□□□□ 0.36
CDC42EP1Q00587 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDC42EP1Q00587 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDC42EP1Q00587 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.33■□□□□ 0.36
CDC42EP1Q00587 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.33■□□□□ 0.36
CDC42EP1Q00587 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDC42EP1Q00587 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.33■□□□□ 0.36
CDC42EP1Q00587 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.33■□□□□ 0.36
CDC42EP1Q00587 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.33■□□□□ 0.36
CDC42EP1Q00587 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDC42EP1Q00587 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDC42EP1Q00587 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDC42EP1Q00587 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDC42EP1Q00587 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.33■□□□□ 0.36
CDC42EP1Q00587 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
CDC42EP1Q00587 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDC42EP1Q00587 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.32■□□□□ 0.36
CDC42EP1Q00587 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CDC42EP1Q00587 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42EP1Q00587 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42EP1Q00587 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42EP1Q00587 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42EP1Q00587 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CDC42EP1Q00587 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42EP1Q00587 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42EP1Q00587 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42EP1Q00587 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.32■□□□□ 0.36
CDC42EP1Q00587 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.32■□□□□ 0.36
CDC42EP1Q00587 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42EP1Q00587 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CDC42EP1Q00587 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.32■□□□□ 0.36
CDC42EP1Q00587 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms