Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61A1P61619 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61A1P61619 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61A1P61619 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61A1P61619 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61A1P61619 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.11□□□□□ -0.15
SEC61A1P61619 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.11□□□□□ -0.15
SEC61A1P61619 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61A1P61619 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61A1P61619 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.11□□□□□ -0.15
SEC61A1P61619 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61A1P61619 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61A1P61619 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.11□□□□□ -0.15
SEC61A1P61619 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61A1P61619 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61A1P61619 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SEC61A1P61619 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
SEC61A1P61619 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61A1P61619 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.11□□□□□ -0.15
SEC61A1P61619 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61A1P61619 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.11□□□□□ -0.15
SEC61A1P61619 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SEC61A1P61619 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61A1P61619 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SEC61A1P61619 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61A1P61619 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.11□□□□□ -0.15
SEC61A1P61619 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61A1P61619 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61A1P61619 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61A1P61619 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61A1P61619 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61A1P61619 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.11□□□□□ -0.15
SEC61A1P61619 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61A1P61619 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.11□□□□□ -0.15
SEC61A1P61619 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.11□□□□□ -0.15
SEC61A1P61619 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.11□□□□□ -0.15
SEC61A1P61619 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61A1P61619 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.11□□□□□ -0.15
SEC61A1P61619 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.11□□□□□ -0.15
SEC61A1P61619 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
SEC61A1P61619 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.11□□□□□ -0.15
SEC61A1P61619 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61A1P61619 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.11□□□□□ -0.15
SEC61A1P61619 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SEC61A1P61619 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61A1P61619 AC134684.3-201ENST00000641758 218 ntBASIC14.11□□□□□ -0.15
SEC61A1P61619 AL139011.1-202ENST00000642063 584 ntBASIC14.11□□□□□ -0.15
SEC61A1P61619 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SEC61A1P61619 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61A1P61619 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.11□□□□□ -0.15
SEC61A1P61619 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SEC61A1P61619 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61A1P61619 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61A1P61619 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.11□□□□□ -0.15
SEC61A1P61619 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SEC61A1P61619 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC61A1P61619 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
SEC61A1P61619 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SEC61A1P61619 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.1□□□□□ -0.15
SEC61A1P61619 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.1□□□□□ -0.15
SEC61A1P61619 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SEC61A1P61619 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.1□□□□□ -0.15
SEC61A1P61619 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.1□□□□□ -0.15
SEC61A1P61619 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.1□□□□□ -0.15
SEC61A1P61619 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SEC61A1P61619 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SEC61A1P61619 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SEC61A1P61619 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC61A1P61619 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC61A1P61619 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SEC61A1P61619 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.1□□□□□ -0.15
SEC61A1P61619 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SEC61A1P61619 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC61A1P61619 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC61A1P61619 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.1□□□□□ -0.15
SEC61A1P61619 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SEC61A1P61619 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC61A1P61619 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.1□□□□□ -0.15
SEC61A1P61619 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.1□□□□□ -0.15
SEC61A1P61619 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SEC61A1P61619 AC004967.1-201ENST00000453589 447 ntBASIC14.1□□□□□ -0.15
SEC61A1P61619 AC074386.1-202ENST00000463561 864 ntBASIC14.1□□□□□ -0.15
SEC61A1P61619 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.1□□□□□ -0.15
SEC61A1P61619 AC005829.1-201ENST00000570002 483 ntBASIC14.1□□□□□ -0.15
SEC61A1P61619 MIR4469-201ENST00000583919 79 ntBASIC14.1□□□□□ -0.15
SEC61A1P61619 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC61A1P61619 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SEC61A1P61619 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC61A1P61619 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.1□□□□□ -0.15
SEC61A1P61619 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC61A1P61619 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SEC61A1P61619 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
SEC61A1P61619 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SEC61A1P61619 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC61A1P61619 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SEC61A1P61619 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.1□□□□□ -0.15
SEC61A1P61619 AC129492.6-201ENST00000611383 1305 ntBASIC14.1□□□□□ -0.15
SEC61A1P61619 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC61A1P61619 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC61A1P61619 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms