Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RHBDL3P58872 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RHBDL3P58872 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RHBDL3P58872 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.72■□□□□ 0.59
RHBDL3P58872 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.72■□□□□ 0.59
RHBDL3P58872 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.72■□□□□ 0.59
RHBDL3P58872 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RHBDL3P58872 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.72■□□□□ 0.59
RHBDL3P58872 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.72■□□□□ 0.59
RHBDL3P58872 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.72■□□□□ 0.59
RHBDL3P58872 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.72■□□□□ 0.59
RHBDL3P58872 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.72■□□□□ 0.59
RHBDL3P58872 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.72■□□□□ 0.59
RHBDL3P58872 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
RHBDL3P58872 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.72■□□□□ 0.59
RHBDL3P58872 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.72■□□□□ 0.59
RHBDL3P58872 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
RHBDL3P58872 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.72■□□□□ 0.59
RHBDL3P58872 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RHBDL3P58872 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.72■□□□□ 0.59
RHBDL3P58872 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.72■□□□□ 0.59
RHBDL3P58872 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.72■□□□□ 0.59
RHBDL3P58872 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RHBDL3P58872 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RHBDL3P58872 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.72■□□□□ 0.59
RHBDL3P58872 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RHBDL3P58872 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RHBDL3P58872 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
RHBDL3P58872 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.72■□□□□ 0.59
RHBDL3P58872 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RHBDL3P58872 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.72■□□□□ 0.59
RHBDL3P58872 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RHBDL3P58872 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RHBDL3P58872 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
RHBDL3P58872 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.71■□□□□ 0.59
RHBDL3P58872 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
RHBDL3P58872 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RHBDL3P58872 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RHBDL3P58872 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RHBDL3P58872 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RHBDL3P58872 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
RHBDL3P58872 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.71■□□□□ 0.59
RHBDL3P58872 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RHBDL3P58872 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RHBDL3P58872 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RHBDL3P58872 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RHBDL3P58872 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RHBDL3P58872 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RHBDL3P58872 AL133267.1-201ENST00000398220 340 ntBASIC18.71■□□□□ 0.59
RHBDL3P58872 KRT223P-202ENST00000449164 1292 ntBASIC18.71■□□□□ 0.59
RHBDL3P58872 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.71■□□□□ 0.59
RHBDL3P58872 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RHBDL3P58872 GAPDHP40-201ENST00000505218 1006 ntBASIC18.71■□□□□ 0.59
RHBDL3P58872 AC104989.1-201ENST00000519711 778 ntBASIC18.71■□□□□ 0.59
RHBDL3P58872 AC068587.3-201ENST00000526613 355 ntBASIC18.71■□□□□ 0.59
RHBDL3P58872 AC015910.1-201ENST00000579400 975 ntBASIC18.71■□□□□ 0.59
RHBDL3P58872 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.71■□□□□ 0.59
RHBDL3P58872 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.71■□□□□ 0.59
RHBDL3P58872 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.71■□□□□ 0.59
RHBDL3P58872 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RHBDL3P58872 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RHBDL3P58872 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RHBDL3P58872 LTB4R2-202ENST00000528054 3092 ntBASIC18.71■□□□□ 0.59
RHBDL3P58872 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RHBDL3P58872 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.71■□□□□ 0.59
RHBDL3P58872 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RHBDL3P58872 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RHBDL3P58872 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RHBDL3P58872 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RHBDL3P58872 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RHBDL3P58872 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RHBDL3P58872 AC093525.8-201ENST00000624099 1342 ntBASIC18.71■□□□□ 0.59
RHBDL3P58872 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RHBDL3P58872 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RHBDL3P58872 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.71■□□□□ 0.59
RHBDL3P58872 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RHBDL3P58872 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.71■□□□□ 0.59
RHBDL3P58872 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.7■□□□□ 0.58
RHBDL3P58872 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RHBDL3P58872 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
RHBDL3P58872 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RHBDL3P58872 AC006449.5-201ENST00000610658 2098 ntBASIC18.7■□□□□ 0.58
RHBDL3P58872 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.7■□□□□ 0.58
RHBDL3P58872 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RHBDL3P58872 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.7■□□□□ 0.58
RHBDL3P58872 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RHBDL3P58872 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RHBDL3P58872 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RHBDL3P58872 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RHBDL3P58872 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RHBDL3P58872 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
RHBDL3P58872 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.7■□□□□ 0.58
RHBDL3P58872 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RHBDL3P58872 AC005229.1-201ENST00000392885 409 ntBASIC18.7■□□□□ 0.58
RHBDL3P58872 AC092933.1-201ENST00000393644 945 ntBASIC18.7■□□□□ 0.58
RHBDL3P58872 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RHBDL3P58872 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RHBDL3P58872 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.7■□□□□ 0.58
RHBDL3P58872 KRT43P-201ENST00000434019 910 ntBASIC18.7■□□□□ 0.58
RHBDL3P58872 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms