Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CLRN1P58418 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CLRN1P58418 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLRN1P58418 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLRN1P58418 GPX1P2-201ENST00000429271 606 ntBASIC14.36□□□□□ -0.11
CLRN1P58418 AC005237.2-201ENST00000434368 219 ntBASIC14.36□□□□□ -0.11
CLRN1P58418 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.36□□□□□ -0.11
CLRN1P58418 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.36□□□□□ -0.11
CLRN1P58418 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.36□□□□□ -0.11
CLRN1P58418 MIR4469-201ENST00000583919 79 ntBASIC14.36□□□□□ -0.11
CLRN1P58418 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.36□□□□□ -0.11
CLRN1P58418 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.36□□□□□ -0.11
CLRN1P58418 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLRN1P58418 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLRN1P58418 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLRN1P58418 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLRN1P58418 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLRN1P58418 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLRN1P58418 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CLRN1P58418 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.36□□□□□ -0.11
CLRN1P58418 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CLRN1P58418 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.36□□□□□ -0.11
CLRN1P58418 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CLRN1P58418 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLRN1P58418 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.36□□□□□ -0.11
CLRN1P58418 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLRN1P58418 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.36□□□□□ -0.11
CLRN1P58418 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.35□□□□□ -0.11
CLRN1P58418 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLRN1P58418 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.35□□□□□ -0.11
CLRN1P58418 AP005117.1-202ENST00000581724 1908 ntBASIC14.35□□□□□ -0.11
CLRN1P58418 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.35□□□□□ -0.11
CLRN1P58418 PCDHA3-202ENST00000532566 4594 ntBASIC14.35□□□□□ -0.11
CLRN1P58418 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLRN1P58418 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CLRN1P58418 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
CLRN1P58418 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLRN1P58418 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CLRN1P58418 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.35□□□□□ -0.11
CLRN1P58418 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.35□□□□□ -0.11
CLRN1P58418 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLRN1P58418 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLRN1P58418 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLRN1P58418 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLRN1P58418 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLRN1P58418 MIR346-201ENST00000362234 95 ntBASIC14.35□□□□□ -0.11
CLRN1P58418 FAM220BP-201ENST00000377689 816 ntBASIC14.35□□□□□ -0.11
CLRN1P58418 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.35□□□□□ -0.11
CLRN1P58418 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.35□□□□□ -0.11
CLRN1P58418 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.35□□□□□ -0.11
CLRN1P58418 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.35□□□□□ -0.11
CLRN1P58418 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.35□□□□□ -0.11
CLRN1P58418 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CLRN1P58418 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.35□□□□□ -0.11
CLRN1P58418 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.35□□□□□ -0.11
CLRN1P58418 AC061975.2-201ENST00000581722 295 ntBASIC14.35□□□□□ -0.11
CLRN1P58418 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.35□□□□□ -0.11
CLRN1P58418 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.35□□□□□ -0.11
CLRN1P58418 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CLRN1P58418 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.35□□□□□ -0.11
CLRN1P58418 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLRN1P58418 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLRN1P58418 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLRN1P58418 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLRN1P58418 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLRN1P58418 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLRN1P58418 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.35□□□□□ -0.11
CLRN1P58418 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.35□□□□□ -0.11
CLRN1P58418 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLRN1P58418 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLRN1P58418 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CLRN1P58418 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.34□□□□□ -0.11
CLRN1P58418 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CLRN1P58418 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLRN1P58418 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLRN1P58418 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CLRN1P58418 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLRN1P58418 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLRN1P58418 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.34□□□□□ -0.11
CLRN1P58418 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.34□□□□□ -0.11
CLRN1P58418 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLRN1P58418 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLRN1P58418 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLRN1P58418 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.34□□□□□ -0.11
CLRN1P58418 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.34□□□□□ -0.11
CLRN1P58418 AC069335.1-201ENST00000489972 472 ntBASIC14.34□□□□□ -0.11
CLRN1P58418 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLRN1P58418 SLC25A39P2-201ENST00000537614 270 ntBASIC14.34□□□□□ -0.11
CLRN1P58418 AC092865.5-201ENST00000545435 363 ntBASIC14.34□□□□□ -0.11
CLRN1P58418 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.34□□□□□ -0.11
CLRN1P58418 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.34□□□□□ -0.11
CLRN1P58418 AC243562.2-201ENST00000561247 970 ntBASIC14.34□□□□□ -0.11
CLRN1P58418 LINC01225-203ENST00000563550 1244 ntBASIC14.34□□□□□ -0.11
CLRN1P58418 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
CLRN1P58418 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.34□□□□□ -0.11
CLRN1P58418 AC105339.1-204ENST00000636249 355 ntBASIC14.34□□□□□ -0.11
CLRN1P58418 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLRN1P58418 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
CLRN1P58418 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLRN1P58418 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms