Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RIPPLY3P57055 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIPPLY3P57055 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIPPLY3P57055 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIPPLY3P57055 ESPNP-201ENST00000270691 2015 ntBASIC13.35□□□□□ -0.27
RIPPLY3P57055 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
RIPPLY3P57055 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC13.35□□□□□ -0.27
RIPPLY3P57055 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.35□□□□□ -0.27
RIPPLY3P57055 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC13.35□□□□□ -0.27
RIPPLY3P57055 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.35□□□□□ -0.27
RIPPLY3P57055 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIPPLY3P57055 FLJ16779-201ENST00000612722 7638 ntBASIC13.35□□□□□ -0.27
RIPPLY3P57055 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.35□□□□□ -0.27
RIPPLY3P57055 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIPPLY3P57055 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
RIPPLY3P57055 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
RIPPLY3P57055 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.35□□□□□ -0.27
RIPPLY3P57055 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RIPPLY3P57055 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIPPLY3P57055 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.35□□□□□ -0.27
RIPPLY3P57055 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
RIPPLY3P57055 AC008741.2-201ENST00000612792 3115 ntBASIC13.35□□□□□ -0.27
RIPPLY3P57055 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RIPPLY3P57055 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RIPPLY3P57055 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RIPPLY3P57055 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC13.34□□□□□ -0.27
RIPPLY3P57055 TCAF2P1-201ENST00000291129 2421 ntBASIC13.34□□□□□ -0.27
RIPPLY3P57055 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC13.34□□□□□ -0.27
RIPPLY3P57055 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.34□□□□□ -0.27
RIPPLY3P57055 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIPPLY3P57055 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RIPPLY3P57055 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIPPLY3P57055 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
RIPPLY3P57055 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC13.34□□□□□ -0.27
RIPPLY3P57055 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIPPLY3P57055 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
RIPPLY3P57055 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RIPPLY3P57055 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIPPLY3P57055 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIPPLY3P57055 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIPPLY3P57055 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIPPLY3P57055 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.34□□□□□ -0.27
RIPPLY3P57055 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIPPLY3P57055 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIPPLY3P57055 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.34□□□□□ -0.27
RIPPLY3P57055 AC007969.1-201ENST00000433675 447 ntBASIC13.34□□□□□ -0.27
RIPPLY3P57055 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.34□□□□□ -0.27
RIPPLY3P57055 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RIPPLY3P57055 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.34□□□□□ -0.27
RIPPLY3P57055 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.34□□□□□ -0.27
RIPPLY3P57055 AC023310.1-201ENST00000554836 735 ntBASIC13.34□□□□□ -0.27
RIPPLY3P57055 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC13.34□□□□□ -0.27
RIPPLY3P57055 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC13.34□□□□□ -0.27
RIPPLY3P57055 AL031055.1-201ENST00000606362 631 ntBASIC13.34□□□□□ -0.27
RIPPLY3P57055 COX6A1P2-201ENST00000620597 330 ntBASIC13.34□□□□□ -0.27
RIPPLY3P57055 AC009084.3-201ENST00000623356 437 ntBASIC13.34□□□□□ -0.27
RIPPLY3P57055 CU634019.7-201ENST00000624153 1185 ntBASIC13.34□□□□□ -0.27
RIPPLY3P57055 FP236241.2-201ENST00000624906 1185 ntBASIC13.34□□□□□ -0.27
RIPPLY3P57055 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.34□□□□□ -0.27
RIPPLY3P57055 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
RIPPLY3P57055 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIPPLY3P57055 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIPPLY3P57055 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
RIPPLY3P57055 PC-208ENST00000529047 1607 ntTSL 3 BASIC13.34□□□□□ -0.27
RIPPLY3P57055 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.34□□□□□ -0.27
RIPPLY3P57055 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIPPLY3P57055 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIPPLY3P57055 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIPPLY3P57055 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.34□□□□□ -0.27
RIPPLY3P57055 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.34□□□□□ -0.27
RIPPLY3P57055 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.34□□□□□ -0.27
RIPPLY3P57055 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
RIPPLY3P57055 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RIPPLY3P57055 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC13.34□□□□□ -0.27
RIPPLY3P57055 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
RIPPLY3P57055 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RIPPLY3P57055 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RIPPLY3P57055 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
RIPPLY3P57055 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RIPPLY3P57055 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RIPPLY3P57055 CD276-203ENST00000537340 2439 ntTSL 2 BASIC13.33□□□□□ -0.27
RIPPLY3P57055 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RIPPLY3P57055 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RIPPLY3P57055 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RIPPLY3P57055 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RIPPLY3P57055 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RIPPLY3P57055 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RIPPLY3P57055 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RIPPLY3P57055 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RIPPLY3P57055 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RIPPLY3P57055 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RIPPLY3P57055 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RIPPLY3P57055 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RIPPLY3P57055 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms