Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S2P56377 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.6■□□□□ 0.09
AP1S2P56377 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S2P56377 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S2P56377 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S2P56377 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
AP1S2P56377 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S2P56377 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S2P56377 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S2P56377 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.6■□□□□ 0.09
AP1S2P56377 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S2P56377 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S2P56377 SPDYE7P-202ENST00000420373 878 ntBASIC15.6■□□□□ 0.09
AP1S2P56377 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.6■□□□□ 0.09
AP1S2P56377 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
AP1S2P56377 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.6■□□□□ 0.09
AP1S2P56377 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.6■□□□□ 0.09
AP1S2P56377 SNHG9-202ENST00000564014 471 ntBASIC15.6■□□□□ 0.09
AP1S2P56377 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S2P56377 AC105021.1-202ENST00000570572 669 ntBASIC15.6■□□□□ 0.09
AP1S2P56377 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.6■□□□□ 0.09
AP1S2P56377 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S2P56377 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S2P56377 AC007967.4-201ENST00000614700 386 ntBASIC15.6■□□□□ 0.09
AP1S2P56377 AC079781.4-201ENST00000641908 219 ntBASIC15.6■□□□□ 0.09
AP1S2P56377 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S2P56377 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S2P56377 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S2P56377 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.6■□□□□ 0.09
AP1S2P56377 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.6■□□□□ 0.09
AP1S2P56377 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S2P56377 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.6■□□□□ 0.09
AP1S2P56377 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S2P56377 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
AP1S2P56377 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.6■□□□□ 0.09
AP1S2P56377 AC068587.6-202ENST00000641839 5619 ntBASIC15.6■□□□□ 0.09
AP1S2P56377 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S2P56377 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S2P56377 AL035456.1-201ENST00000456064 1369 ntBASIC15.6■□□□□ 0.09
AP1S2P56377 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.6■□□□□ 0.09
AP1S2P56377 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
AP1S2P56377 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP1S2P56377 PAUPAR-201ENST00000630360 2965 ntBASIC15.6■□□□□ 0.09
AP1S2P56377 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
AP1S2P56377 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
AP1S2P56377 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.59■□□□□ 0.09
AP1S2P56377 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
AP1S2P56377 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
AP1S2P56377 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.59■□□□□ 0.09
AP1S2P56377 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP1S2P56377 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
AP1S2P56377 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.59■□□□□ 0.09
AP1S2P56377 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.59■□□□□ 0.09
AP1S2P56377 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
AP1S2P56377 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP1S2P56377 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP1S2P56377 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.59■□□□□ 0.09
AP1S2P56377 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
AP1S2P56377 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.59■□□□□ 0.09
AP1S2P56377 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.59■□□□□ 0.09
AP1S2P56377 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
AP1S2P56377 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.59■□□□□ 0.09
AP1S2P56377 AL512356.2-201ENST00000546955 174 ntBASIC15.59■□□□□ 0.09
AP1S2P56377 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.59■□□□□ 0.09
AP1S2P56377 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.59■□□□□ 0.09
AP1S2P56377 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.59■□□□□ 0.09
AP1S2P56377 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.59■□□□□ 0.09
AP1S2P56377 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP1S2P56377 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
AP1S2P56377 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
AP1S2P56377 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
AP1S2P56377 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP1S2P56377 PRAL-201ENST00000624952 3286 ntBASIC15.59■□□□□ 0.09
AP1S2P56377 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP1S2P56377 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP1S2P56377 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP1S2P56377 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.59■□□□□ 0.09
AP1S2P56377 CICP6-201ENST00000457191 2729 ntBASIC15.59■□□□□ 0.09
AP1S2P56377 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
AP1S2P56377 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.09
AP1S2P56377 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
AP1S2P56377 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.58■□□□□ 0.09
AP1S2P56377 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.58■□□□□ 0.09
AP1S2P56377 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.58■□□□□ 0.09
AP1S2P56377 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.58■□□□□ 0.09
AP1S2P56377 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP1S2P56377 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP1S2P56377 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.58■□□□□ 0.08
AP1S2P56377 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP1S2P56377 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP1S2P56377 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.58■□□□□ 0.08
AP1S2P56377 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP1S2P56377 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
AP1S2P56377 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP1S2P56377 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
AP1S2P56377 MIR1233-2-201ENST00000408138 82 ntBASIC15.58■□□□□ 0.08
AP1S2P56377 MIR1233-1-201ENST00000408722 82 ntBASIC15.58■□□□□ 0.08
AP1S2P56377 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.58■□□□□ 0.08
AP1S2P56377 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.58■□□□□ 0.08
AP1S2P56377 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms