Protein–RNA interactions for Protein: P55008

AIF1, Allograft inflammatory factor 1, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AIF1P55008 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.46■□□□□ 0.23
AIF1P55008 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.46■□□□□ 0.23
AIF1P55008 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.46■□□□□ 0.23
AIF1P55008 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.46■□□□□ 0.23
AIF1P55008 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.46■□□□□ 0.23
AIF1P55008 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
AIF1P55008 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
AIF1P55008 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.46■□□□□ 0.23
AIF1P55008 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
AIF1P55008 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AIF1P55008 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.46■□□□□ 0.23
AIF1P55008 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AIF1P55008 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
AIF1P55008 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
AIF1P55008 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AIF1P55008 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
AIF1P55008 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
AIF1P55008 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
AIF1P55008 AC087499.5-201ENST00000452760 1342 ntBASIC16.45■□□□□ 0.22
AIF1P55008 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AIF1P55008 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AIF1P55008 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.45■□□□□ 0.22
AIF1P55008 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
AIF1P55008 Z97205.2-201ENST00000564697 1639 ntBASIC16.45■□□□□ 0.22
AIF1P55008 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AIF1P55008 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.45■□□□□ 0.22
AIF1P55008 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AIF1P55008 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AIF1P55008 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AIF1P55008 AC092183.1-201ENST00000469884 875 ntBASIC16.45■□□□□ 0.22
AIF1P55008 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.45■□□□□ 0.22
AIF1P55008 AC027369.6-201ENST00000525520 931 ntBASIC16.45■□□□□ 0.22
AIF1P55008 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
AIF1P55008 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.45■□□□□ 0.22
AIF1P55008 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.45■□□□□ 0.22
AIF1P55008 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
AIF1P55008 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
AIF1P55008 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AIF1P55008 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AIF1P55008 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AIF1P55008 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.45■□□□□ 0.22
AIF1P55008 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AIF1P55008 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AIF1P55008 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.45■□□□□ 0.22
AIF1P55008 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
AIF1P55008 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AIF1P55008 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
AIF1P55008 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.45■□□□□ 0.22
AIF1P55008 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AIF1P55008 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AIF1P55008 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AIF1P55008 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
AIF1P55008 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AIF1P55008 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AIF1P55008 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
AIF1P55008 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.45■□□□□ 0.22
AIF1P55008 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AIF1P55008 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
AIF1P55008 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AIF1P55008 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AIF1P55008 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AIF1P55008 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
AIF1P55008 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
AIF1P55008 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
AIF1P55008 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AIF1P55008 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.44■□□□□ 0.22
AIF1P55008 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.44■□□□□ 0.22
AIF1P55008 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
AIF1P55008 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AIF1P55008 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.44■□□□□ 0.22
AIF1P55008 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
AIF1P55008 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.44■□□□□ 0.22
AIF1P55008 RN7SL618P-201ENST00000477850 296 ntBASIC16.44■□□□□ 0.22
AIF1P55008 AC097493.3-201ENST00000509725 367 ntBASIC16.44■□□□□ 0.22
AIF1P55008 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.44■□□□□ 0.22
AIF1P55008 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.44■□□□□ 0.22
AIF1P55008 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.44■□□□□ 0.22
AIF1P55008 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AIF1P55008 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.44■□□□□ 0.22
AIF1P55008 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AIF1P55008 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.44■□□□□ 0.22
AIF1P55008 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AIF1P55008 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AIF1P55008 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AIF1P55008 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
AIF1P55008 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.44■□□□□ 0.22
AIF1P55008 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
AIF1P55008 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
AIF1P55008 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AIF1P55008 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.44■□□□□ 0.22
AIF1P55008 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
AIF1P55008 AC105917.1-201ENST00000506637 2539 ntBASIC16.44■□□□□ 0.22
AIF1P55008 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
AIF1P55008 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AIF1P55008 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
AIF1P55008 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AIF1P55008 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AIF1P55008 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AIF1P55008 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.43■□□□□ 0.22
AIF1P55008 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms