Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.17■□□□□ 0.18
LIMK2P53671 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK2P53671 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK2P53671 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK2P53671 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.17■□□□□ 0.18
LIMK2P53671 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.17■□□□□ 0.18
LIMK2P53671 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK2P53671 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.17■□□□□ 0.18
LIMK2P53671 FAM58DP-201ENST00000428076 619 ntBASIC16.17■□□□□ 0.18
LIMK2P53671 SPCS2P4-201ENST00000436160 681 ntBASIC16.17■□□□□ 0.18
LIMK2P53671 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.17■□□□□ 0.18
LIMK2P53671 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.17■□□□□ 0.18
LIMK2P53671 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK2P53671 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.17■□□□□ 0.18
LIMK2P53671 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.17■□□□□ 0.18
LIMK2P53671 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK2P53671 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK2P53671 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK2P53671 Z92544.3-201ENST00000624747 417 ntBASIC16.17■□□□□ 0.18
LIMK2P53671 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK2P53671 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK2P53671 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LIMK2P53671 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK2P53671 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK2P53671 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LIMK2P53671 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK2P53671 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK2P53671 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK2P53671 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK2P53671 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK2P53671 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
LIMK2P53671 TSPY26P-202ENST00000565928 3884 ntBASIC16.17■□□□□ 0.18
LIMK2P53671 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LIMK2P53671 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK2P53671 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK2P53671 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LIMK2P53671 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK2P53671 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.16■□□□□ 0.18
LIMK2P53671 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.16■□□□□ 0.18
LIMK2P53671 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK2P53671 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
LIMK2P53671 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK2P53671 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK2P53671 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK2P53671 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK2P53671 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK2P53671 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.16■□□□□ 0.18
LIMK2P53671 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK2P53671 IGHV3-62-201ENST00000520057 340 ntBASIC16.16■□□□□ 0.18
LIMK2P53671 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.16■□□□□ 0.18
LIMK2P53671 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LIMK2P53671 AL512356.2-201ENST00000546955 174 ntBASIC16.16■□□□□ 0.18
LIMK2P53671 KRT8P23-201ENST00000560090 1207 ntBASIC16.16■□□□□ 0.18
LIMK2P53671 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.16■□□□□ 0.18
LIMK2P53671 MIR4321-201ENST00000592276 80 ntBASIC16.16■□□□□ 0.18
LIMK2P53671 AL096865.1-201ENST00000606796 927 ntBASIC16.16■□□□□ 0.18
LIMK2P53671 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.16■□□□□ 0.18
LIMK2P53671 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.16■□□□□ 0.18
LIMK2P53671 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK2P53671 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK2P53671 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK2P53671 SSR4P1-203ENST00000599569 2260 ntBASIC16.16■□□□□ 0.18
LIMK2P53671 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LIMK2P53671 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK2P53671 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK2P53671 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK2P53671 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK2P53671 AC020658.6-201ENST00000623564 1870 ntBASIC16.16■□□□□ 0.18
LIMK2P53671 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK2P53671 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK2P53671 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK2P53671 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LIMK2P53671 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
LIMK2P53671 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.16■□□□□ 0.18
LIMK2P53671 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LIMK2P53671 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LIMK2P53671 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.15■□□□□ 0.18
LIMK2P53671 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.15■□□□□ 0.18
LIMK2P53671 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIMK2P53671 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIMK2P53671 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIMK2P53671 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LIMK2P53671 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
LIMK2P53671 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.15■□□□□ 0.18
LIMK2P53671 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIMK2P53671 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LIMK2P53671 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LIMK2P53671 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIMK2P53671 WASH6P-202ENST00000359512 1437 ntBASIC16.15■□□□□ 0.18
LIMK2P53671 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.15■□□□□ 0.18
LIMK2P53671 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.15■□□□□ 0.18
LIMK2P53671 CNN2P2-201ENST00000443536 909 ntBASIC16.15■□□□□ 0.18
LIMK2P53671 CNN2P3-201ENST00000450201 906 ntBASIC16.15■□□□□ 0.18
LIMK2P53671 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.15■□□□□ 0.18
LIMK2P53671 LINC01225-203ENST00000563550 1244 ntBASIC16.15■□□□□ 0.18
LIMK2P53671 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.15■□□□□ 0.18
LIMK2P53671 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.15■□□□□ 0.18
LIMK2P53671 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LIMK2P53671 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LIMK2P53671 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms