Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.61□□□□□ -0.07
HMGA2P52926 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.61□□□□□ -0.07
HMGA2P52926 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGA2P52926 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.61□□□□□ -0.07
HMGA2P52926 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGA2P52926 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGA2P52926 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGA2P52926 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGA2P52926 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.61□□□□□ -0.07
HMGA2P52926 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.61□□□□□ -0.07
HMGA2P52926 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGA2P52926 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.61□□□□□ -0.07
HMGA2P52926 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.61□□□□□ -0.07
HMGA2P52926 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGA2P52926 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGA2P52926 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
HMGA2P52926 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
HMGA2P52926 SPTSSB-204ENST00000617024 1292 ntBASIC14.61□□□□□ -0.07
HMGA2P52926 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.61□□□□□ -0.07
HMGA2P52926 AC116407.3-201ENST00000623905 1129 ntBASIC14.61□□□□□ -0.07
HMGA2P52926 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGA2P52926 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGA2P52926 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGA2P52926 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGA2P52926 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.61□□□□□ -0.07
HMGA2P52926 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
HMGA2P52926 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGA2P52926 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGA2P52926 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGA2P52926 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGA2P52926 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGA2P52926 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGA2P52926 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.6□□□□□ -0.07
HMGA2P52926 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
HMGA2P52926 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.6□□□□□ -0.07
HMGA2P52926 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HMGA2P52926 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.6□□□□□ -0.07
HMGA2P52926 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGA2P52926 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
HMGA2P52926 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
HMGA2P52926 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGA2P52926 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.6□□□□□ -0.07
HMGA2P52926 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGA2P52926 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.6□□□□□ -0.07
HMGA2P52926 AC025580.3-201ENST00000617932 1424 ntBASIC14.6□□□□□ -0.07
HMGA2P52926 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGA2P52926 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGA2P52926 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HMGA2P52926 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
HMGA2P52926 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGA2P52926 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGA2P52926 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGA2P52926 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.6□□□□□ -0.07
HMGA2P52926 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.6□□□□□ -0.07
HMGA2P52926 AL031284.1-201ENST00000419297 478 ntBASIC14.6□□□□□ -0.07
HMGA2P52926 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.6□□□□□ -0.07
HMGA2P52926 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.6□□□□□ -0.07
HMGA2P52926 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
HMGA2P52926 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
HMGA2P52926 IGHV3-22-201ENST00000520721 359 ntBASIC14.6□□□□□ -0.07
HMGA2P52926 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.6□□□□□ -0.07
HMGA2P52926 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGA2P52926 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.6□□□□□ -0.07
HMGA2P52926 AL049840.3-201ENST00000602669 611 ntBASIC14.6□□□□□ -0.07
HMGA2P52926 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.6□□□□□ -0.07
HMGA2P52926 AL773604.1-201ENST00000617417 272 ntBASIC14.6□□□□□ -0.07
HMGA2P52926 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGA2P52926 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGA2P52926 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGA2P52926 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGA2P52926 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HMGA2P52926 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGA2P52926 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
HMGA2P52926 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.6□□□□□ -0.07
HMGA2P52926 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGA2P52926 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGA2P52926 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGA2P52926 MROH4P-201ENST00000431302 1578 ntBASIC14.6□□□□□ -0.07
HMGA2P52926 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGA2P52926 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGA2P52926 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGA2P52926 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.59□□□□□ -0.07
HMGA2P52926 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HMGA2P52926 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGA2P52926 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.59□□□□□ -0.07
HMGA2P52926 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGA2P52926 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGA2P52926 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.59□□□□□ -0.07
HMGA2P52926 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGA2P52926 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HMGA2P52926 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.59□□□□□ -0.07
HMGA2P52926 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.59□□□□□ -0.07
HMGA2P52926 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.59□□□□□ -0.07
HMGA2P52926 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.59□□□□□ -0.07
HMGA2P52926 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HMGA2P52926 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HMGA2P52926 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGA2P52926 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.59□□□□□ -0.07
HMGA2P52926 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.59□□□□□ -0.07
HMGA2P52926 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms