Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
SOX2P48431 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SOX2P48431 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SOX2P48431 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SOX2P48431 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SOX2P48431 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.17□□□□□ -0.14
SOX2P48431 AL109954.1-202ENST00000564051 2148 ntBASIC14.17□□□□□ -0.14
SOX2P48431 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SOX2P48431 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.17□□□□□ -0.14
SOX2P48431 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.17□□□□□ -0.14
SOX2P48431 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.17□□□□□ -0.14
SOX2P48431 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.17□□□□□ -0.14
SOX2P48431 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.17□□□□□ -0.14
SOX2P48431 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.17□□□□□ -0.14
SOX2P48431 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SOX2P48431 OR7E47P-204ENST00000575924 449 ntBASIC14.17□□□□□ -0.14
SOX2P48431 CLEC4GP1-201ENST00000596555 870 ntBASIC14.17□□□□□ -0.14
SOX2P48431 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.17□□□□□ -0.14
SOX2P48431 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SOX2P48431 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SOX2P48431 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SOX2P48431 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SOX2P48431 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SOX2P48431 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.17□□□□□ -0.14
SOX2P48431 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.17□□□□□ -0.14
SOX2P48431 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SOX2P48431 AP002414.3-201ENST00000589352 1468 ntBASIC14.17□□□□□ -0.14
SOX2P48431 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
SOX2P48431 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SOX2P48431 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SOX2P48431 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.17□□□□□ -0.14
SOX2P48431 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SOX2P48431 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SOX2P48431 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SOX2P48431 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.17□□□□□ -0.14
SOX2P48431 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.16□□□□□ -0.14
SOX2P48431 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SOX2P48431 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SOX2P48431 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.16□□□□□ -0.14
SOX2P48431 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.16□□□□□ -0.14
SOX2P48431 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SOX2P48431 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SOX2P48431 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SOX2P48431 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SOX2P48431 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
SOX2P48431 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.16□□□□□ -0.14
SOX2P48431 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SOX2P48431 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SOX2P48431 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SOX2P48431 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SOX2P48431 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.16□□□□□ -0.14
SOX2P48431 FAM185BP-201ENST00000443595 716 ntBASIC14.16□□□□□ -0.14
SOX2P48431 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SOX2P48431 AC108073.2-201ENST00000464002 357 ntBASIC14.16□□□□□ -0.14
SOX2P48431 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.16□□□□□ -0.14
SOX2P48431 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.16□□□□□ -0.14
SOX2P48431 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SOX2P48431 AC005593.1-201ENST00000624894 515 ntBASIC14.16□□□□□ -0.14
SOX2P48431 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SOX2P48431 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SOX2P48431 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.16□□□□□ -0.14
SOX2P48431 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SOX2P48431 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SOX2P48431 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SOX2P48431 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SOX2P48431 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SOX2P48431 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
SOX2P48431 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SOX2P48431 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SOX2P48431 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.16□□□□□ -0.14
SOX2P48431 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SOX2P48431 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.16□□□□□ -0.14
SOX2P48431 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
SOX2P48431 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SOX2P48431 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.15□□□□□ -0.14
SOX2P48431 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.15□□□□□ -0.14
SOX2P48431 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.15□□□□□ -0.14
SOX2P48431 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SOX2P48431 AC099063.4-201ENST00000641099 1602 ntBASIC14.15□□□□□ -0.14
SOX2P48431 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SOX2P48431 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SOX2P48431 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
SOX2P48431 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
SOX2P48431 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SOX2P48431 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SOX2P48431 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.15□□□□□ -0.14
SOX2P48431 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SOX2P48431 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SOX2P48431 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SOX2P48431 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SOX2P48431 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SOX2P48431 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SOX2P48431 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SOX2P48431 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.15□□□□□ -0.14
SOX2P48431 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SOX2P48431 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SOX2P48431 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SOX2P48431 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SOX2P48431 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SOX2P48431 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms