Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.03□□□□□ -0.16
GDNFP39905 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
GDNFP39905 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GDNFP39905 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GDNFP39905 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GDNFP39905 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GDNFP39905 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GDNFP39905 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
GDNFP39905 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GDNFP39905 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
GDNFP39905 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GDNFP39905 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.03□□□□□ -0.16
GDNFP39905 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GDNFP39905 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GDNFP39905 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GDNFP39905 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.03□□□□□ -0.16
GDNFP39905 AC073621.1-201ENST00000392730 636 ntBASIC14.03□□□□□ -0.16
GDNFP39905 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.03□□□□□ -0.16
GDNFP39905 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GDNFP39905 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.03□□□□□ -0.16
GDNFP39905 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.03□□□□□ -0.16
GDNFP39905 KRT18P67-201ENST00000432816 1264 ntBASIC14.03□□□□□ -0.16
GDNFP39905 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.03□□□□□ -0.16
GDNFP39905 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.03□□□□□ -0.16
GDNFP39905 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GDNFP39905 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.03□□□□□ -0.16
GDNFP39905 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.03□□□□□ -0.16
GDNFP39905 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.03□□□□□ -0.16
GDNFP39905 AP002469.2-201ENST00000531724 424 ntBASIC14.03□□□□□ -0.16
GDNFP39905 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
GDNFP39905 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.03□□□□□ -0.16
GDNFP39905 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
GDNFP39905 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.03□□□□□ -0.16
GDNFP39905 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.03□□□□□ -0.16
GDNFP39905 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GDNFP39905 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.03□□□□□ -0.16
GDNFP39905 AL049840.3-201ENST00000602669 611 ntBASIC14.03□□□□□ -0.16
GDNFP39905 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
GDNFP39905 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.03□□□□□ -0.16
GDNFP39905 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
GDNFP39905 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
GDNFP39905 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.03□□□□□ -0.16
GDNFP39905 AP002414.3-201ENST00000589352 1468 ntBASIC14.03□□□□□ -0.16
GDNFP39905 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.03□□□□□ -0.16
GDNFP39905 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GDNFP39905 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GDNFP39905 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.03□□□□□ -0.16
GDNFP39905 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
GDNFP39905 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
GDNFP39905 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GDNFP39905 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.03□□□□□ -0.16
GDNFP39905 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GDNFP39905 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GDNFP39905 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GDNFP39905 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.03□□□□□ -0.16
GDNFP39905 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.02□□□□□ -0.16
GDNFP39905 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GDNFP39905 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GDNFP39905 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.02□□□□□ -0.16
GDNFP39905 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GDNFP39905 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
GDNFP39905 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
GDNFP39905 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GDNFP39905 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GDNFP39905 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.02□□□□□ -0.16
GDNFP39905 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
GDNFP39905 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GDNFP39905 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.02□□□□□ -0.16
GDNFP39905 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GDNFP39905 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
GDNFP39905 OR2I1P-209ENST00000641730 5365 ntBASIC14.02□□□□□ -0.16
GDNFP39905 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GDNFP39905 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.02□□□□□ -0.16
GDNFP39905 GRK6P1-201ENST00000400595 1711 ntBASIC14.02□□□□□ -0.16
GDNFP39905 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.02□□□□□ -0.16
GDNFP39905 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GDNFP39905 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.16
GDNFP39905 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GDNFP39905 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GDNFP39905 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.02□□□□□ -0.17
GDNFP39905 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
GDNFP39905 MRPL3P1-201ENST00000400109 1033 ntBASIC14.02□□□□□ -0.17
GDNFP39905 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.02□□□□□ -0.17
GDNFP39905 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
GDNFP39905 KRT18P27-201ENST00000427733 1299 ntBASIC14.02□□□□□ -0.17
GDNFP39905 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.02□□□□□ -0.17
GDNFP39905 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
GDNFP39905 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.02□□□□□ -0.17
GDNFP39905 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.02□□□□□ -0.17
GDNFP39905 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.02□□□□□ -0.17
GDNFP39905 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.02□□□□□ -0.17
GDNFP39905 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.02□□□□□ -0.17
GDNFP39905 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.02□□□□□ -0.17
GDNFP39905 AL121894.2-201ENST00000602977 491 ntBASIC14.02□□□□□ -0.17
GDNFP39905 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.02□□□□□ -0.17
GDNFP39905 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GDNFP39905 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.02□□□□□ -0.17
GDNFP39905 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GDNFP39905 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GDNFP39905 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms