Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.23■□□□□ 0.03
MMP11P24347 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
MMP11P24347 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP11P24347 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.22■□□□□ 0.03
MMP11P24347 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP11P24347 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP11P24347 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP11P24347 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP11P24347 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP11P24347 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MMP11P24347 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
MMP11P24347 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP11P24347 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP11P24347 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.22■□□□□ 0.03
MMP11P24347 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
MMP11P24347 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP11P24347 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
MMP11P24347 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MMP11P24347 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
MMP11P24347 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.22■□□□□ 0.03
MMP11P24347 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.22■□□□□ 0.03
MMP11P24347 AC015922.1-201ENST00000421102 1152 ntBASIC15.22■□□□□ 0.03
MMP11P24347 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.22■□□□□ 0.03
MMP11P24347 AC009477.1-201ENST00000452936 217 ntBASIC15.22■□□□□ 0.03
MMP11P24347 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
MMP11P24347 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
MMP11P24347 SERBP1P5-201ENST00000510079 1181 ntBASIC15.22■□□□□ 0.03
MMP11P24347 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.22■□□□□ 0.03
MMP11P24347 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.22■□□□□ 0.03
MMP11P24347 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.22■□□□□ 0.03
MMP11P24347 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.22■□□□□ 0.03
MMP11P24347 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.22■□□□□ 0.03
MMP11P24347 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.22■□□□□ 0.03
MMP11P24347 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP11P24347 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
MMP11P24347 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP11P24347 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.22■□□□□ 0.03
MMP11P24347 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP11P24347 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP11P24347 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.22■□□□□ 0.03
MMP11P24347 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
MMP11P24347 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP11P24347 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP11P24347 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP11P24347 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP11P24347 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MMP11P24347 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
MMP11P24347 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MMP11P24347 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MMP11P24347 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.21■□□□□ 0.03
MMP11P24347 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MMP11P24347 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
MMP11P24347 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.21■□□□□ 0.03
MMP11P24347 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.21■□□□□ 0.03
MMP11P24347 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.21■□□□□ 0.03
MMP11P24347 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
MMP11P24347 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
MMP11P24347 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.21■□□□□ 0.03
MMP11P24347 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MMP11P24347 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
MMP11P24347 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
MMP11P24347 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
MMP11P24347 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.21■□□□□ 0.03
MMP11P24347 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.21■□□□□ 0.03
MMP11P24347 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MMP11P24347 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MMP11P24347 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MMP11P24347 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MMP11P24347 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.21■□□□□ 0.03
MMP11P24347 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.21■□□□□ 0.03
MMP11P24347 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.21■□□□□ 0.03
MMP11P24347 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MMP11P24347 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.21■□□□□ 0.03
MMP11P24347 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.21■□□□□ 0.03
MMP11P24347 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.21■□□□□ 0.03
MMP11P24347 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MMP11P24347 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.21■□□□□ 0.03
MMP11P24347 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
MMP11P24347 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MMP11P24347 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MMP11P24347 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
MMP11P24347 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MMP11P24347 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.21■□□□□ 0.03
MMP11P24347 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MMP11P24347 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
MMP11P24347 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.21■□□□□ 0.02
MMP11P24347 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
MMP11P24347 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP11P24347 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.2■□□□□ 0.02
MMP11P24347 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MMP11P24347 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
MMP11P24347 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP11P24347 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.2■□□□□ 0.02
MMP11P24347 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MMP11P24347 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
MMP11P24347 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.2■□□□□ 0.02
MMP11P24347 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP11P24347 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.2■□□□□ 0.02
MMP11P24347 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP11P24347 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms