Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.75□□□□□ -0.21
TNFSF4P23510 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TNFSF4P23510 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.75□□□□□ -0.21
TNFSF4P23510 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TNFSF4P23510 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TNFSF4P23510 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TNFSF4P23510 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TNFSF4P23510 HAUS4P1-201ENST00000406739 1145 ntBASIC13.75□□□□□ -0.21
TNFSF4P23510 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TNFSF4P23510 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.75□□□□□ -0.21
TNFSF4P23510 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.75□□□□□ -0.21
TNFSF4P23510 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TNFSF4P23510 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TNFSF4P23510 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TNFSF4P23510 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.75□□□□□ -0.21
TNFSF4P23510 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.75□□□□□ -0.21
TNFSF4P23510 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.75□□□□□ -0.21
TNFSF4P23510 AC243562.2-201ENST00000561247 970 ntBASIC13.75□□□□□ -0.21
TNFSF4P23510 AC140878.1-201ENST00000565277 250 ntBASIC13.75□□□□□ -0.21
TNFSF4P23510 AC105021.1-202ENST00000570572 669 ntBASIC13.75□□□□□ -0.21
TNFSF4P23510 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.75□□□□□ -0.21
TNFSF4P23510 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TNFSF4P23510 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
TNFSF4P23510 AL161772.1-201ENST00000610494 4412 ntBASIC13.75□□□□□ -0.21
TNFSF4P23510 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TNFSF4P23510 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TNFSF4P23510 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TNFSF4P23510 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
TNFSF4P23510 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TNFSF4P23510 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.75□□□□□ -0.21
TNFSF4P23510 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TNFSF4P23510 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TNFSF4P23510 MTHFR-217ENST00000641820 1569 ntBASIC13.75□□□□□ -0.21
TNFSF4P23510 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.75□□□□□ -0.21
TNFSF4P23510 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TNFSF4P23510 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TNFSF4P23510 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
TNFSF4P23510 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.74□□□□□ -0.21
TNFSF4P23510 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.74□□□□□ -0.21
TNFSF4P23510 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.74□□□□□ -0.21
TNFSF4P23510 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.74□□□□□ -0.21
TNFSF4P23510 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TNFSF4P23510 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TNFSF4P23510 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.74□□□□□ -0.21
TNFSF4P23510 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TNFSF4P23510 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.74□□□□□ -0.21
TNFSF4P23510 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.74□□□□□ -0.21
TNFSF4P23510 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.74□□□□□ -0.21
TNFSF4P23510 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TNFSF4P23510 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TNFSF4P23510 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TNFSF4P23510 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TNFSF4P23510 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TNFSF4P23510 CETN4P-206ENST00000642099 2168 ntBASIC13.74□□□□□ -0.21
TNFSF4P23510 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TNFSF4P23510 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TNFSF4P23510 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TNFSF4P23510 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.74□□□□□ -0.21
TNFSF4P23510 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TNFSF4P23510 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.74□□□□□ -0.21
TNFSF4P23510 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TNFSF4P23510 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.74□□□□□ -0.21
TNFSF4P23510 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.74□□□□□ -0.21
TNFSF4P23510 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.74□□□□□ -0.21
TNFSF4P23510 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.74□□□□□ -0.21
TNFSF4P23510 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.74□□□□□ -0.21
TNFSF4P23510 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.74□□□□□ -0.21
TNFSF4P23510 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TNFSF4P23510 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TNFSF4P23510 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
TNFSF4P23510 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TNFSF4P23510 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TNFSF4P23510 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
TNFSF4P23510 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TNFSF4P23510 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TNFSF4P23510 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.74□□□□□ -0.21
TNFSF4P23510 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TNFSF4P23510 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TNFSF4P23510 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TNFSF4P23510 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
TNFSF4P23510 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TNFSF4P23510 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
TNFSF4P23510 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TNFSF4P23510 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TNFSF4P23510 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TNFSF4P23510 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TNFSF4P23510 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TNFSF4P23510 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TNFSF4P23510 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.73□□□□□ -0.21
TNFSF4P23510 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TNFSF4P23510 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TNFSF4P23510 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TNFSF4P23510 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TNFSF4P23510 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.73□□□□□ -0.21
TNFSF4P23510 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TNFSF4P23510 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
TNFSF4P23510 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
TNFSF4P23510 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
TNFSF4P23510 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TNFSF4P23510 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms