Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN1P18031 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN1P18031 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN1P18031 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN1P18031 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN1P18031 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.92■□□□□ 0.3
PTPN1P18031 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PTPN1P18031 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.92■□□□□ 0.3
PTPN1P18031 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN1P18031 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.92■□□□□ 0.3
PTPN1P18031 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PTPN1P18031 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN1P18031 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN1P18031 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN1P18031 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.92■□□□□ 0.3
PTPN1P18031 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.92■□□□□ 0.3
PTPN1P18031 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.92■□□□□ 0.3
PTPN1P18031 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
PTPN1P18031 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.92■□□□□ 0.3
PTPN1P18031 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN1P18031 LINC02447-202ENST00000501888 2146 ntBASIC16.92■□□□□ 0.3
PTPN1P18031 TERF1P3-201ENST00000505638 1227 ntBASIC16.92■□□□□ 0.3
PTPN1P18031 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.92■□□□□ 0.3
PTPN1P18031 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.92■□□□□ 0.3
PTPN1P18031 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PTPN1P18031 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.92■□□□□ 0.3
PTPN1P18031 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN1P18031 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.92■□□□□ 0.3
PTPN1P18031 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.92■□□□□ 0.3
PTPN1P18031 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.92■□□□□ 0.3
PTPN1P18031 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.92■□□□□ 0.3
PTPN1P18031 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN1P18031 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.92■□□□□ 0.3
PTPN1P18031 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PTPN1P18031 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.92■□□□□ 0.3
PTPN1P18031 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
PTPN1P18031 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.92■□□□□ 0.3
PTPN1P18031 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN1P18031 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN1P18031 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN1P18031 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PTPN1P18031 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN1P18031 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN1P18031 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN1P18031 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN1P18031 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PTPN1P18031 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN1P18031 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PTPN1P18031 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.91■□□□□ 0.3
PTPN1P18031 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.91■□□□□ 0.3
PTPN1P18031 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN1P18031 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.91■□□□□ 0.3
PTPN1P18031 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN1P18031 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN1P18031 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN1P18031 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN1P18031 SPTLC1P1-201ENST00000447199 261 ntBASIC16.91■□□□□ 0.3
PTPN1P18031 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.91■□□□□ 0.3
PTPN1P18031 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN1P18031 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.91■□□□□ 0.3
PTPN1P18031 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.91■□□□□ 0.3
PTPN1P18031 AC074044.1-201ENST00000609673 707 ntBASIC16.91■□□□□ 0.3
PTPN1P18031 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.91■□□□□ 0.3
PTPN1P18031 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN1P18031 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN1P18031 LINC02199-201ENST00000506655 2702 ntBASIC16.91■□□□□ 0.3
PTPN1P18031 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN1P18031 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN1P18031 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN1P18031 Z97205.2-201ENST00000564697 1639 ntBASIC16.91■□□□□ 0.3
PTPN1P18031 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN1P18031 AL603832.2-201ENST00000566195 2125 ntBASIC16.91■□□□□ 0.3
PTPN1P18031 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN1P18031 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.91■□□□□ 0.3
PTPN1P18031 AC018892.3-201ENST00000623986 2499 ntBASIC16.91■□□□□ 0.3
PTPN1P18031 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN1P18031 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN1P18031 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.91■□□□□ 0.3
PTPN1P18031 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PTPN1P18031 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PTPN1P18031 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PTPN1P18031 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
PTPN1P18031 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN1P18031 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN1P18031 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN1P18031 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN1P18031 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PTPN1P18031 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN1P18031 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN1P18031 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN1P18031 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.9■□□□□ 0.3
PTPN1P18031 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN1P18031 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN1P18031 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN1P18031 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN1P18031 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN1P18031 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.9■□□□□ 0.3
PTPN1P18031 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PTPN1P18031 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.9■□□□□ 0.3
PTPN1P18031 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms