Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.6■□□□□ 0.89
MS4A1P11836 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC20.6■□□□□ 0.89
MS4A1P11836 AC243562.2-201ENST00000561247 970 ntBASIC20.6■□□□□ 0.89
MS4A1P11836 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
MS4A1P11836 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MS4A1P11836 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
MS4A1P11836 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MS4A1P11836 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MS4A1P11836 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MS4A1P11836 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC20.6■□□□□ 0.89
MS4A1P11836 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC20.6■□□□□ 0.89
MS4A1P11836 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC20.6■□□□□ 0.89
MS4A1P11836 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MS4A1P11836 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC20.6■□□□□ 0.89
MS4A1P11836 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC20.6■□□□□ 0.89
MS4A1P11836 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MS4A1P11836 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MS4A1P11836 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MS4A1P11836 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MS4A1P11836 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MS4A1P11836 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MS4A1P11836 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC20.59■□□□□ 0.89
MS4A1P11836 PRAL-201ENST00000624952 3286 ntBASIC20.59■□□□□ 0.89
MS4A1P11836 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MS4A1P11836 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MS4A1P11836 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC20.59■□□□□ 0.89
MS4A1P11836 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
MS4A1P11836 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MS4A1P11836 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MS4A1P11836 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
MS4A1P11836 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MS4A1P11836 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
MS4A1P11836 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
MS4A1P11836 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.59■□□□□ 0.89
MS4A1P11836 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MS4A1P11836 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MS4A1P11836 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
MS4A1P11836 POLD2P1-201ENST00000511220 997 ntBASIC20.59■□□□□ 0.89
MS4A1P11836 IGHV3-62-201ENST00000520057 340 ntBASIC20.59■□□□□ 0.89
MS4A1P11836 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.59■□□□□ 0.89
MS4A1P11836 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC20.59■□□□□ 0.89
MS4A1P11836 AP000842.3-202ENST00000569238 1080 ntBASIC20.59■□□□□ 0.89
MS4A1P11836 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.59■□□□□ 0.89
MS4A1P11836 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
MS4A1P11836 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MS4A1P11836 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC20.59■□□□□ 0.89
MS4A1P11836 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
MS4A1P11836 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC20.59■□□□□ 0.89
MS4A1P11836 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
MS4A1P11836 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
MS4A1P11836 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MS4A1P11836 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC20.59■□□□□ 0.89
MS4A1P11836 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
MS4A1P11836 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MS4A1P11836 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MS4A1P11836 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MS4A1P11836 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MS4A1P11836 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MS4A1P11836 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MS4A1P11836 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
MS4A1P11836 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC20.58■□□□□ 0.89
MS4A1P11836 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MS4A1P11836 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
MS4A1P11836 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.58■□□□□ 0.89
MS4A1P11836 SPCS2P4-201ENST00000436160 681 ntBASIC20.58■□□□□ 0.89
MS4A1P11836 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.58■□□□□ 0.89
MS4A1P11836 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.58■□□□□ 0.89
MS4A1P11836 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
MS4A1P11836 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC20.58■□□□□ 0.89
MS4A1P11836 AC079140.1-201ENST00000508039 487 ntBASIC20.58■□□□□ 0.89
MS4A1P11836 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC20.58■□□□□ 0.89
MS4A1P11836 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.58■□□□□ 0.89
MS4A1P11836 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC20.58■□□□□ 0.89
MS4A1P11836 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.58■□□□□ 0.89
MS4A1P11836 LINC01225-203ENST00000563550 1244 ntBASIC20.58■□□□□ 0.89
MS4A1P11836 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC20.58■□□□□ 0.89
MS4A1P11836 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.58■□□□□ 0.89
MS4A1P11836 AC084121.4-201ENST00000641598 221 ntBASIC20.58■□□□□ 0.89
MS4A1P11836 AF228730.8-201ENST00000642140 221 ntBASIC20.58■□□□□ 0.89
MS4A1P11836 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC20.58■□□□□ 0.89
MS4A1P11836 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
MS4A1P11836 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC20.58■□□□□ 0.88
MS4A1P11836 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
MS4A1P11836 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC20.58■□□□□ 0.88
MS4A1P11836 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC20.58■□□□□ 0.88
MS4A1P11836 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MS4A1P11836 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
MS4A1P11836 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MS4A1P11836 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC20.58■□□□□ 0.88
MS4A1P11836 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MS4A1P11836 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC20.57■□□□□ 0.88
MS4A1P11836 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MS4A1P11836 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
MS4A1P11836 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MS4A1P11836 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC20.57■□□□□ 0.88
MS4A1P11836 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
MS4A1P11836 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
MS4A1P11836 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MS4A1P11836 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC20.57■□□□□ 0.88
MS4A1P11836 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms