Protein–RNA interactions for Protein: P0CJ79

ZNF888, Zinc finger protein 888, humanhuman

Predicted RBP Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF888P0CJ79 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.2■□□□□ 0.02
ZNF888P0CJ79 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 EEF1DP4-201ENST00000446006 880 ntBASIC15.2■□□□□ 0.02
ZNF888P0CJ79 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 AL390754.1-201ENST00000619088 582 ntBASIC15.2■□□□□ 0.02
ZNF888P0CJ79 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF888P0CJ79 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF888P0CJ79 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.19■□□□□ 0.02
ZNF888P0CJ79 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ZNF888P0CJ79 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF888P0CJ79 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF888P0CJ79 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF888P0CJ79 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF888P0CJ79 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF888P0CJ79 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF888P0CJ79 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF888P0CJ79 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF888P0CJ79 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ZNF888P0CJ79 AZGP1P1-201ENST00000411909 902 ntBASIC15.19■□□□□ 0.02
ZNF888P0CJ79 AC055876.3-201ENST00000431496 288 ntBASIC15.19■□□□□ 0.02
ZNF888P0CJ79 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.19■□□□□ 0.02
ZNF888P0CJ79 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF888P0CJ79 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.19■□□□□ 0.02
ZNF888P0CJ79 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF888P0CJ79 AL390955.2-201ENST00000603032 514 ntBASIC15.19■□□□□ 0.02
ZNF888P0CJ79 AC138649.4-201ENST00000612222 287 ntBASIC15.19■□□□□ 0.02
ZNF888P0CJ79 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.19■□□□□ 0.02
ZNF888P0CJ79 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
ZNF888P0CJ79 PRAL-201ENST00000624952 3286 ntBASIC15.19■□□□□ 0.02
ZNF888P0CJ79 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.19■□□□□ 0.02
ZNF888P0CJ79 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF888P0CJ79 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
ZNF888P0CJ79 AC100757.3-201ENST00000622361 1406 ntBASIC15.18■□□□□ 0.02
ZNF888P0CJ79 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF888P0CJ79 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
ZNF888P0CJ79 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
ZNF888P0CJ79 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.18■□□□□ 0.02
ZNF888P0CJ79 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF888P0CJ79 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
ZNF888P0CJ79 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF888P0CJ79 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF888P0CJ79 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF888P0CJ79 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF888P0CJ79 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.18■□□□□ 0.02
ZNF888P0CJ79 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.18■□□□□ 0.02
ZNF888P0CJ79 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.18■□□□□ 0.02
ZNF888P0CJ79 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.18■□□□□ 0.02
ZNF888P0CJ79 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.18■□□□□ 0.02
ZNF888P0CJ79 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
ZNF888P0CJ79 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.18■□□□□ 0.02
ZNF888P0CJ79 SERBP1P3-201ENST00000459980 809 ntBASIC15.18■□□□□ 0.02
ZNF888P0CJ79 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF888P0CJ79 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.18■□□□□ 0.02
ZNF888P0CJ79 AC005498.2-205ENST00000593218 784 ntBASIC15.18■□□□□ 0.02
ZNF888P0CJ79 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.18■□□□□ 0.02
ZNF888P0CJ79 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF888P0CJ79 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF888P0CJ79 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms