Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.53□□□□□ -0.08
FREM3P0C091 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.53□□□□□ -0.08
FREM3P0C091 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
FREM3P0C091 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.53□□□□□ -0.08
FREM3P0C091 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.53□□□□□ -0.08
FREM3P0C091 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
FREM3P0C091 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
FREM3P0C091 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
FREM3P0C091 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
FREM3P0C091 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
FREM3P0C091 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
FREM3P0C091 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
FREM3P0C091 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.52□□□□□ -0.08
FREM3P0C091 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
FREM3P0C091 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
FREM3P0C091 AL035456.1-201ENST00000456064 1369 ntBASIC14.52□□□□□ -0.08
FREM3P0C091 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
FREM3P0C091 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
FREM3P0C091 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
FREM3P0C091 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
FREM3P0C091 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.08
FREM3P0C091 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.52□□□□□ -0.09
FREM3P0C091 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FREM3P0C091 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.52□□□□□ -0.09
FREM3P0C091 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
FREM3P0C091 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.52□□□□□ -0.09
FREM3P0C091 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.52□□□□□ -0.09
FREM3P0C091 AC190387.1-201ENST00000551683 408 ntBASIC14.52□□□□□ -0.09
FREM3P0C091 CHCHD2P3-201ENST00000603038 451 ntBASIC14.52□□□□□ -0.09
FREM3P0C091 AC009118.2-201ENST00000613275 655 ntBASIC14.52□□□□□ -0.09
FREM3P0C091 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
FREM3P0C091 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.52□□□□□ -0.09
FREM3P0C091 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
FREM3P0C091 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.52□□□□□ -0.09
FREM3P0C091 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.52□□□□□ -0.09
FREM3P0C091 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.52□□□□□ -0.09
FREM3P0C091 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FREM3P0C091 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.52□□□□□ -0.09
FREM3P0C091 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.52□□□□□ -0.09
FREM3P0C091 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FREM3P0C091 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.51□□□□□ -0.09
FREM3P0C091 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FREM3P0C091 DGCR5-201ENST00000399539 862 ntBASIC14.51□□□□□ -0.09
FREM3P0C091 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.51□□□□□ -0.09
FREM3P0C091 AC009407.1-201ENST00000568958 598 ntBASIC14.51□□□□□ -0.09
FREM3P0C091 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.51□□□□□ -0.09
FREM3P0C091 AC132938.2-201ENST00000579188 680 ntBASIC14.51□□□□□ -0.09
FREM3P0C091 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.51□□□□□ -0.09
FREM3P0C091 AL591163.1-201ENST00000641757 987 ntBASIC14.51□□□□□ -0.09
FREM3P0C091 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
FREM3P0C091 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.51□□□□□ -0.09
FREM3P0C091 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
FREM3P0C091 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.51□□□□□ -0.09
FREM3P0C091 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
FREM3P0C091 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FREM3P0C091 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FREM3P0C091 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FREM3P0C091 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.51□□□□□ -0.09
FREM3P0C091 KRT8P37-201ENST00000451609 1420 ntBASIC14.51□□□□□ -0.09
FREM3P0C091 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.51□□□□□ -0.09
FREM3P0C091 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
FREM3P0C091 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
FREM3P0C091 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
FREM3P0C091 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FREM3P0C091 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
FREM3P0C091 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FREM3P0C091 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.51□□□□□ -0.09
FREM3P0C091 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FREM3P0C091 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.51□□□□□ -0.09
FREM3P0C091 BNIP3P1-202ENST00000550043 1585 ntBASIC14.51□□□□□ -0.09
FREM3P0C091 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
FREM3P0C091 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
FREM3P0C091 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
FREM3P0C091 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
FREM3P0C091 RN7SL618P-201ENST00000477850 296 ntBASIC14.51□□□□□ -0.09
FREM3P0C091 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.51□□□□□ -0.09
FREM3P0C091 SPDYE22P-201ENST00000582158 798 ntBASIC14.51□□□□□ -0.09
FREM3P0C091 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
FREM3P0C091 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.51□□□□□ -0.09
FREM3P0C091 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
FREM3P0C091 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.51□□□□□ -0.09
FREM3P0C091 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
FREM3P0C091 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.51□□□□□ -0.09
FREM3P0C091 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
FREM3P0C091 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FREM3P0C091 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
FREM3P0C091 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.51□□□□□ -0.09
FREM3P0C091 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
FREM3P0C091 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
FREM3P0C091 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FREM3P0C091 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
FREM3P0C091 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.51□□□□□ -0.09
FREM3P0C091 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.51□□□□□ -0.09
FREM3P0C091 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.51□□□□□ -0.09
FREM3P0C091 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FREM3P0C091 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
FREM3P0C091 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
FREM3P0C091 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
FREM3P0C091 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
FREM3P0C091 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms