Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXC6P09630 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXC6P09630 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXC6P09630 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXC6P09630 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HOXC6P09630 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.93■□□□□ 0.46
HOXC6P09630 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.93■□□□□ 0.46
HOXC6P09630 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HOXC6P09630 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXC6P09630 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXC6P09630 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.93■□□□□ 0.46
HOXC6P09630 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXC6P09630 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HOXC6P09630 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXC6P09630 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXC6P09630 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HOXC6P09630 PRORSD1P-202ENST00000563365 2154 ntBASIC17.93■□□□□ 0.46
HOXC6P09630 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.93■□□□□ 0.46
HOXC6P09630 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXC6P09630 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
HOXC6P09630 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.93■□□□□ 0.46
HOXC6P09630 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXC6P09630 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
HOXC6P09630 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.93■□□□□ 0.46
HOXC6P09630 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.93■□□□□ 0.46
HOXC6P09630 HNRNPUP1-201ENST00000554987 333 ntBASIC17.93■□□□□ 0.46
HOXC6P09630 GNRHR2-203ENST00000581100 1187 ntBASIC17.93■□□□□ 0.46
HOXC6P09630 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.93■□□□□ 0.46
HOXC6P09630 AC010328.2-201ENST00000597698 1111 ntBASIC17.93■□□□□ 0.46
HOXC6P09630 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.93■□□□□ 0.46
HOXC6P09630 AC244669.2-201ENST00000612320 853 ntBASIC17.93■□□□□ 0.46
HOXC6P09630 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXC6P09630 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXC6P09630 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXC6P09630 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXC6P09630 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXC6P09630 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HOXC6P09630 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXC6P09630 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.92■□□□□ 0.46
HOXC6P09630 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXC6P09630 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXC6P09630 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXC6P09630 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXC6P09630 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXC6P09630 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXC6P09630 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HOXC6P09630 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.92■□□□□ 0.46
HOXC6P09630 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXC6P09630 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXC6P09630 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HOXC6P09630 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXC6P09630 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.92■□□□□ 0.46
HOXC6P09630 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXC6P09630 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
HOXC6P09630 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXC6P09630 AC099548.2-209ENST00000480264 625 ntBASIC17.92■□□□□ 0.46
HOXC6P09630 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXC6P09630 AC022137.2-201ENST00000503482 481 ntBASIC17.92■□□□□ 0.46
HOXC6P09630 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.92■□□□□ 0.46
HOXC6P09630 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.92■□□□□ 0.46
HOXC6P09630 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXC6P09630 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.92■□□□□ 0.46
HOXC6P09630 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXC6P09630 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXC6P09630 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXC6P09630 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.92■□□□□ 0.46
HOXC6P09630 AL139099.5-201ENST00000635274 300 ntBASIC17.92■□□□□ 0.46
HOXC6P09630 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.92■□□□□ 0.46
HOXC6P09630 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXC6P09630 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXC6P09630 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXC6P09630 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.92■□□□□ 0.46
HOXC6P09630 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXC6P09630 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXC6P09630 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.92■□□□□ 0.46
HOXC6P09630 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXC6P09630 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HOXC6P09630 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC6P09630 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.91■□□□□ 0.46
HOXC6P09630 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC6P09630 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.91■□□□□ 0.46
HOXC6P09630 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC6P09630 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.91■□□□□ 0.46
HOXC6P09630 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.91■□□□□ 0.46
HOXC6P09630 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.91■□□□□ 0.46
HOXC6P09630 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC6P09630 REXO1L8P-201ENST00000604378 1897 ntBASIC17.91■□□□□ 0.46
HOXC6P09630 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC6P09630 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC6P09630 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.91■□□□□ 0.46
HOXC6P09630 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC6P09630 MIR1247-201ENST00000408206 136 ntBASIC17.91■□□□□ 0.46
HOXC6P09630 GPAA1P2-201ENST00000417923 928 ntBASIC17.91■□□□□ 0.46
HOXC6P09630 CNN2P8-201ENST00000421872 913 ntBASIC17.91■□□□□ 0.46
HOXC6P09630 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.91■□□□□ 0.46
HOXC6P09630 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC6P09630 RPL13AP20-201ENST00000459725 609 ntBASIC17.91■□□□□ 0.46
HOXC6P09630 ZNF767P-206ENST00000513792 565 ntBASIC17.91■□□□□ 0.46
HOXC6P09630 AC026410.3-201ENST00000514280 936 ntBASIC17.91■□□□□ 0.46
HOXC6P09630 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms