Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CD48P09326 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.6■□□□□ 0.25
CD48P09326 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.6■□□□□ 0.25
CD48P09326 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CD48P09326 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CD48P09326 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD48P09326 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CD48P09326 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD48P09326 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CD48P09326 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD48P09326 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CD48P09326 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD48P09326 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD48P09326 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CD48P09326 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD48P09326 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CD48P09326 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CD48P09326 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CD48P09326 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD48P09326 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD48P09326 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.59■□□□□ 0.25
CD48P09326 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD48P09326 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CD48P09326 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.59■□□□□ 0.25
CD48P09326 RBPMS2P1-201ENST00000437762 623 ntBASIC16.59■□□□□ 0.25
CD48P09326 SPDYE14P-201ENST00000442619 822 ntBASIC16.59■□□□□ 0.25
CD48P09326 AL139010.1-201ENST00000454878 894 ntBASIC16.59■□□□□ 0.25
CD48P09326 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
CD48P09326 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.59■□□□□ 0.25
CD48P09326 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.59■□□□□ 0.25
CD48P09326 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.59■□□□□ 0.25
CD48P09326 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CD48P09326 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.59■□□□□ 0.25
CD48P09326 MIR4313-201ENST00000580760 101 ntBASIC16.59■□□□□ 0.25
CD48P09326 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.59■□□□□ 0.25
CD48P09326 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.59■□□□□ 0.25
CD48P09326 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.59■□□□□ 0.25
CD48P09326 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.59■□□□□ 0.25
CD48P09326 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.59■□□□□ 0.25
CD48P09326 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD48P09326 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.59■□□□□ 0.25
CD48P09326 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CD48P09326 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CD48P09326 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CD48P09326 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.59■□□□□ 0.25
CD48P09326 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CD48P09326 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD48P09326 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CD48P09326 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD48P09326 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD48P09326 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.59■□□□□ 0.25
CD48P09326 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD48P09326 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD48P09326 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD48P09326 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD48P09326 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CD48P09326 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD48P09326 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.59■□□□□ 0.25
CD48P09326 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD48P09326 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD48P09326 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CD48P09326 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.59■□□□□ 0.25
CD48P09326 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.59■□□□□ 0.25
CD48P09326 AC020658.6-201ENST00000623564 1870 ntBASIC16.59■□□□□ 0.25
CD48P09326 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD48P09326 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CD48P09326 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
CD48P09326 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.58■□□□□ 0.25
CD48P09326 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CD48P09326 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CD48P09326 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CD48P09326 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
CD48P09326 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CD48P09326 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CD48P09326 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.58■□□□□ 0.25
CD48P09326 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.58■□□□□ 0.25
CD48P09326 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CD48P09326 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CD48P09326 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CD48P09326 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.58■□□□□ 0.24
CD48P09326 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.58■□□□□ 0.24
CD48P09326 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.58■□□□□ 0.24
CD48P09326 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD48P09326 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.58■□□□□ 0.24
CD48P09326 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CD48P09326 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.58■□□□□ 0.24
CD48P09326 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD48P09326 AC004835.2-201ENST00000603762 682 ntBASIC16.58■□□□□ 0.24
CD48P09326 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.58■□□□□ 0.24
CD48P09326 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD48P09326 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CD48P09326 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.58■□□□□ 0.24
CD48P09326 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
CD48P09326 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD48P09326 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
CD48P09326 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD48P09326 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD48P09326 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.58■□□□□ 0.24
CD48P09326 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.58■□□□□ 0.24
CD48P09326 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms