Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CYP3A4P08684 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CYP3A4P08684 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CYP3A4P08684 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CYP3A4P08684 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CYP3A4P08684 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
CYP3A4P08684 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CYP3A4P08684 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CYP3A4P08684 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CYP3A4P08684 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CYP3A4P08684 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.88■□□□□ 0.45
CYP3A4P08684 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.88■□□□□ 0.45
CYP3A4P08684 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.88■□□□□ 0.45
CYP3A4P08684 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.88■□□□□ 0.45
CYP3A4P08684 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.88■□□□□ 0.45
CYP3A4P08684 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.88■□□□□ 0.45
CYP3A4P08684 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
CYP3A4P08684 LINC02199-201ENST00000506655 2702 ntBASIC17.88■□□□□ 0.45
CYP3A4P08684 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.88■□□□□ 0.45
CYP3A4P08684 AP005117.1-202ENST00000581724 1908 ntBASIC17.88■□□□□ 0.45
CYP3A4P08684 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CYP3A4P08684 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.88■□□□□ 0.45
CYP3A4P08684 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CYP3A4P08684 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.88■□□□□ 0.45
CYP3A4P08684 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CYP3A4P08684 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CYP3A4P08684 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.88■□□□□ 0.45
CYP3A4P08684 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CYP3A4P08684 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CYP3A4P08684 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CYP3A4P08684 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CYP3A4P08684 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CYP3A4P08684 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.87■□□□□ 0.45
CYP3A4P08684 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CYP3A4P08684 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
CYP3A4P08684 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CYP3A4P08684 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CYP3A4P08684 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CYP3A4P08684 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CYP3A4P08684 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CYP3A4P08684 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.87■□□□□ 0.45
CYP3A4P08684 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CYP3A4P08684 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.87■□□□□ 0.45
CYP3A4P08684 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CYP3A4P08684 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.87■□□□□ 0.45
CYP3A4P08684 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.87■□□□□ 0.45
CYP3A4P08684 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CYP3A4P08684 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CYP3A4P08684 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.87■□□□□ 0.45
CYP3A4P08684 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CYP3A4P08684 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CYP3A4P08684 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CYP3A4P08684 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CYP3A4P08684 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CYP3A4P08684 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CYP3A4P08684 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CYP3A4P08684 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CYP3A4P08684 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CYP3A4P08684 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CYP3A4P08684 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CYP3A4P08684 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CYP3A4P08684 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.87■□□□□ 0.45
CYP3A4P08684 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.86■□□□□ 0.45
CYP3A4P08684 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CYP3A4P08684 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CYP3A4P08684 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CYP3A4P08684 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CYP3A4P08684 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.86■□□□□ 0.45
CYP3A4P08684 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.86■□□□□ 0.45
CYP3A4P08684 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.86■□□□□ 0.45
CYP3A4P08684 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CYP3A4P08684 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CYP3A4P08684 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.86■□□□□ 0.45
CYP3A4P08684 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CYP3A4P08684 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CYP3A4P08684 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.86■□□□□ 0.45
CYP3A4P08684 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CYP3A4P08684 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CYP3A4P08684 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.86■□□□□ 0.45
CYP3A4P08684 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.86■□□□□ 0.45
CYP3A4P08684 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CYP3A4P08684 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.86■□□□□ 0.45
CYP3A4P08684 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CYP3A4P08684 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.86■□□□□ 0.45
CYP3A4P08684 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.86■□□□□ 0.45
CYP3A4P08684 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.86■□□□□ 0.45
CYP3A4P08684 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.86■□□□□ 0.45
CYP3A4P08684 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CYP3A4P08684 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CYP3A4P08684 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CYP3A4P08684 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.86■□□□□ 0.45
CYP3A4P08684 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CYP3A4P08684 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CYP3A4P08684 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.86■□□□□ 0.45
CYP3A4P08684 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
CYP3A4P08684 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CYP3A4P08684 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CYP3A4P08684 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.86■□□□□ 0.45
CYP3A4P08684 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CYP3A4P08684 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms