Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSDP07339 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSDP07339 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CTSDP07339 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSDP07339 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSDP07339 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.36□□□□□ -0.27
CTSDP07339 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSDP07339 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CTSDP07339 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
CTSDP07339 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSDP07339 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.35□□□□□ -0.27
CTSDP07339 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CTSDP07339 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
CTSDP07339 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSDP07339 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.35□□□□□ -0.27
CTSDP07339 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSDP07339 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CTSDP07339 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSDP07339 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSDP07339 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.35□□□□□ -0.27
CTSDP07339 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSDP07339 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.35□□□□□ -0.27
CTSDP07339 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSDP07339 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.35□□□□□ -0.27
CTSDP07339 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.35□□□□□ -0.27
CTSDP07339 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSDP07339 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CTSDP07339 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSDP07339 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSDP07339 FGFR3P6-201ENST00000457012 610 ntBASIC13.35□□□□□ -0.27
CTSDP07339 SCARNA2-201ENST00000458748 420 ntBASIC13.35□□□□□ -0.27
CTSDP07339 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.35□□□□□ -0.27
CTSDP07339 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.35□□□□□ -0.27
CTSDP07339 AP002469.2-201ENST00000531724 424 ntBASIC13.35□□□□□ -0.27
CTSDP07339 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.35□□□□□ -0.27
CTSDP07339 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
CTSDP07339 MIR3652-201ENST00000579335 131 ntBASIC13.35□□□□□ -0.27
CTSDP07339 AL732292.2-201ENST00000609649 430 ntBASIC13.35□□□□□ -0.27
CTSDP07339 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.35□□□□□ -0.27
CTSDP07339 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.35□□□□□ -0.27
CTSDP07339 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.35□□□□□ -0.27
CTSDP07339 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CTSDP07339 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CTSDP07339 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CTSDP07339 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.35□□□□□ -0.27
CTSDP07339 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CTSDP07339 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSDP07339 AGAP7P-201ENST00000582299 2062 ntBASIC13.35□□□□□ -0.27
CTSDP07339 AGAP14-201ENST00000624701 2060 ntBASIC13.35□□□□□ -0.27
CTSDP07339 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CTSDP07339 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.35□□□□□ -0.27
CTSDP07339 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.35□□□□□ -0.27
CTSDP07339 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSDP07339 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSDP07339 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CTSDP07339 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CTSDP07339 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.34□□□□□ -0.27
CTSDP07339 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CTSDP07339 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.34□□□□□ -0.27
CTSDP07339 AC126365.1-201ENST00000578585 1514 ntBASIC13.34□□□□□ -0.27
CTSDP07339 KRT8P44-201ENST00000441609 1350 ntBASIC13.34□□□□□ -0.27
CTSDP07339 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CTSDP07339 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CTSDP07339 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CTSDP07339 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.34□□□□□ -0.27
CTSDP07339 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CTSDP07339 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSDP07339 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.34□□□□□ -0.27
CTSDP07339 AL390755.1-201ENST00000623716 2027 ntBASIC13.34□□□□□ -0.27
CTSDP07339 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSDP07339 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSDP07339 WASH6P-202ENST00000359512 1437 ntBASIC13.34□□□□□ -0.27
CTSDP07339 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CTSDP07339 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.34□□□□□ -0.27
CTSDP07339 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.34□□□□□ -0.27
CTSDP07339 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CTSDP07339 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSDP07339 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CTSDP07339 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSDP07339 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.34□□□□□ -0.27
CTSDP07339 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.34□□□□□ -0.27
CTSDP07339 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.34□□□□□ -0.27
CTSDP07339 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.34□□□□□ -0.27
CTSDP07339 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.34□□□□□ -0.27
CTSDP07339 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.34□□□□□ -0.27
CTSDP07339 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSDP07339 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSDP07339 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CTSDP07339 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSDP07339 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSDP07339 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSDP07339 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CTSDP07339 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
CTSDP07339 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CTSDP07339 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CTSDP07339 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.33□□□□□ -0.27
CTSDP07339 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
CTSDP07339 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
CTSDP07339 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSDP07339 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms