Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOC1P02654 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
APOC1P02654 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC1P02654 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC1P02654 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC1P02654 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC1P02654 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.26□□□□□ -0.13
APOC1P02654 AC002056.1-201ENST00000395613 760 ntBASIC14.26□□□□□ -0.13
APOC1P02654 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.26□□□□□ -0.13
APOC1P02654 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.26□□□□□ -0.13
APOC1P02654 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOC1P02654 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
APOC1P02654 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC1P02654 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.26□□□□□ -0.13
APOC1P02654 AC064836.3-201ENST00000607928 673 ntBASIC14.26□□□□□ -0.13
APOC1P02654 AC004877.2-201ENST00000623941 599 ntBASIC14.26□□□□□ -0.13
APOC1P02654 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
APOC1P02654 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
APOC1P02654 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.26□□□□□ -0.13
APOC1P02654 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOC1P02654 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC1P02654 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC1P02654 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC1P02654 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC1P02654 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC1P02654 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.25□□□□□ -0.13
APOC1P02654 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC1P02654 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.25□□□□□ -0.13
APOC1P02654 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.25□□□□□ -0.13
APOC1P02654 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
APOC1P02654 WASH6P-202ENST00000359512 1437 ntBASIC14.25□□□□□ -0.13
APOC1P02654 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOC1P02654 AC104109.2-201ENST00000602919 1418 ntBASIC14.25□□□□□ -0.13
APOC1P02654 AC025580.3-201ENST00000617932 1424 ntBASIC14.25□□□□□ -0.13
APOC1P02654 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC1P02654 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC1P02654 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.25□□□□□ -0.13
APOC1P02654 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.25□□□□□ -0.13
APOC1P02654 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC1P02654 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
APOC1P02654 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.25□□□□□ -0.13
APOC1P02654 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.25□□□□□ -0.13
APOC1P02654 PMS2P7-201ENST00000506558 1336 ntBASIC14.25□□□□□ -0.13
APOC1P02654 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOC1P02654 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOC1P02654 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
APOC1P02654 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.25□□□□□ -0.13
APOC1P02654 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC1P02654 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.25□□□□□ -0.13
APOC1P02654 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.25□□□□□ -0.13
APOC1P02654 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOC1P02654 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
APOC1P02654 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOC1P02654 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.25□□□□□ -0.13
APOC1P02654 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.25□□□□□ -0.13
APOC1P02654 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC1P02654 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.25□□□□□ -0.13
APOC1P02654 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.25□□□□□ -0.13
APOC1P02654 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.25□□□□□ -0.13
APOC1P02654 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
APOC1P02654 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.25□□□□□ -0.13
APOC1P02654 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC1P02654 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.25□□□□□ -0.13
APOC1P02654 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.25□□□□□ -0.13
APOC1P02654 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
APOC1P02654 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.25□□□□□ -0.13
APOC1P02654 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC1P02654 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.25□□□□□ -0.13
APOC1P02654 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC1P02654 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC1P02654 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.25□□□□□ -0.13
APOC1P02654 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC1P02654 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOC1P02654 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC1P02654 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOC1P02654 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.25□□□□□ -0.13
APOC1P02654 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC1P02654 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC1P02654 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
APOC1P02654 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.25□□□□□ -0.13
APOC1P02654 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC1P02654 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.25□□□□□ -0.13
APOC1P02654 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC1P02654 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC1P02654 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC1P02654 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.25□□□□□ -0.13
APOC1P02654 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOC1P02654 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC1P02654 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.24□□□□□ -0.13
APOC1P02654 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOC1P02654 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
APOC1P02654 LINC02447-202ENST00000501888 2146 ntBASIC14.24□□□□□ -0.13
APOC1P02654 PCDHA3-202ENST00000532566 4594 ntBASIC14.24□□□□□ -0.13
APOC1P02654 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC1P02654 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.24□□□□□ -0.13
APOC1P02654 CDC14C-201ENST00000428251 1719 ntBASIC14.24□□□□□ -0.13
APOC1P02654 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
APOC1P02654 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.24□□□□□ -0.13
APOC1P02654 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
APOC1P02654 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms