Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
KRT6AP02538 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
KRT6AP02538 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
KRT6AP02538 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
KRT6AP02538 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
KRT6AP02538 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.09
KRT6AP02538 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.58■□□□□ 0.09
KRT6AP02538 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.58■□□□□ 0.09
KRT6AP02538 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
KRT6AP02538 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.58■□□□□ 0.09
KRT6AP02538 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.58■□□□□ 0.09
KRT6AP02538 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
KRT6AP02538 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
KRT6AP02538 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
KRT6AP02538 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
KRT6AP02538 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.58■□□□□ 0.08
KRT6AP02538 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
KRT6AP02538 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
KRT6AP02538 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.58■□□□□ 0.08
KRT6AP02538 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
KRT6AP02538 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
KRT6AP02538 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
KRT6AP02538 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.58■□□□□ 0.08
KRT6AP02538 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.58■□□□□ 0.08
KRT6AP02538 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.58■□□□□ 0.08
KRT6AP02538 GPX1P2-201ENST00000429271 606 ntBASIC15.58■□□□□ 0.08
KRT6AP02538 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.58■□□□□ 0.08
KRT6AP02538 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.58■□□□□ 0.08
KRT6AP02538 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.58■□□□□ 0.08
KRT6AP02538 AC092865.6-201ENST00000642101 219 ntBASIC15.58■□□□□ 0.08
KRT6AP02538 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
KRT6AP02538 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
KRT6AP02538 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
KRT6AP02538 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
KRT6AP02538 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.58■□□□□ 0.08
KRT6AP02538 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.58■□□□□ 0.08
KRT6AP02538 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
KRT6AP02538 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
KRT6AP02538 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
KRT6AP02538 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
KRT6AP02538 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
KRT6AP02538 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
KRT6AP02538 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.58■□□□□ 0.08
KRT6AP02538 AC092384.3-202ENST00000564646 2873 ntBASIC15.58■□□□□ 0.08
KRT6AP02538 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
KRT6AP02538 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.57■□□□□ 0.08
KRT6AP02538 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.08
KRT6AP02538 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT6AP02538 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
KRT6AP02538 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT6AP02538 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT6AP02538 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.57■□□□□ 0.08
KRT6AP02538 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT6AP02538 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT6AP02538 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT6AP02538 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
KRT6AP02538 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
KRT6AP02538 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.57■□□□□ 0.08
KRT6AP02538 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
KRT6AP02538 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.57■□□□□ 0.08
KRT6AP02538 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.57■□□□□ 0.08
KRT6AP02538 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.57■□□□□ 0.08
KRT6AP02538 SLC25A1P1-201ENST00000528351 927 ntBASIC15.57■□□□□ 0.08
KRT6AP02538 FAM86C2P-203ENST00000528684 1004 ntBASIC15.57■□□□□ 0.08
KRT6AP02538 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
KRT6AP02538 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.57■□□□□ 0.08
KRT6AP02538 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT6AP02538 SPTSSB-204ENST00000617024 1292 ntBASIC15.57■□□□□ 0.08
KRT6AP02538 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
KRT6AP02538 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
KRT6AP02538 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT6AP02538 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.57■□□□□ 0.08
KRT6AP02538 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
KRT6AP02538 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.57■□□□□ 0.08
KRT6AP02538 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.57■□□□□ 0.08
KRT6AP02538 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT6AP02538 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
KRT6AP02538 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
KRT6AP02538 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
KRT6AP02538 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.57■□□□□ 0.08
KRT6AP02538 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT6AP02538 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.57■□□□□ 0.08
KRT6AP02538 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
KRT6AP02538 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.57■□□□□ 0.08
KRT6AP02538 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT6AP02538 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT6AP02538 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6AP02538 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6AP02538 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
KRT6AP02538 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6AP02538 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
KRT6AP02538 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6AP02538 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6AP02538 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.56■□□□□ 0.08
KRT6AP02538 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6AP02538 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6AP02538 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6AP02538 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6AP02538 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6AP02538 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms