Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.03■□□□□ 0.16
TRBC1P01850 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBC1P01850 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBC1P01850 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBC1P01850 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBC1P01850 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.03■□□□□ 0.16
TRBC1P01850 AL512361.1-201ENST00000554200 418 ntBASIC16.03■□□□□ 0.16
TRBC1P01850 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.03■□□□□ 0.16
TRBC1P01850 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBC1P01850 AL844908.2-201ENST00000609461 460 ntBASIC16.03■□□□□ 0.16
TRBC1P01850 MIR6069-201ENST00000620069 79 ntBASIC16.03■□□□□ 0.16
TRBC1P01850 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.03■□□□□ 0.16
TRBC1P01850 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBC1P01850 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBC1P01850 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRBC1P01850 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.03■□□□□ 0.16
TRBC1P01850 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBC1P01850 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBC1P01850 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBC1P01850 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRBC1P01850 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBC1P01850 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TRBC1P01850 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBC1P01850 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBC1P01850 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBC1P01850 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBC1P01850 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBC1P01850 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.02■□□□□ 0.16
TRBC1P01850 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBC1P01850 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBC1P01850 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRBC1P01850 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBC1P01850 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.02■□□□□ 0.16
TRBC1P01850 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
TRBC1P01850 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TRBC1P01850 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
TRBC1P01850 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.02■□□□□ 0.16
TRBC1P01850 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRBC1P01850 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
TRBC1P01850 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.02■□□□□ 0.16
TRBC1P01850 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBC1P01850 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRBC1P01850 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBC1P01850 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBC1P01850 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBC1P01850 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBC1P01850 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.02■□□□□ 0.16
TRBC1P01850 PHKG1P2-201ENST00000457537 863 ntBASIC16.02■□□□□ 0.16
TRBC1P01850 RN7SL618P-201ENST00000477850 296 ntBASIC16.02■□□□□ 0.16
TRBC1P01850 AC004890.2-204ENST00000481968 304 ntBASIC16.02■□□□□ 0.16
TRBC1P01850 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBC1P01850 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.02■□□□□ 0.16
TRBC1P01850 AC010336.2-201ENST00000564226 506 ntBASIC16.02■□□□□ 0.16
TRBC1P01850 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.02■□□□□ 0.16
TRBC1P01850 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.02■□□□□ 0.16
TRBC1P01850 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.02■□□□□ 0.16
TRBC1P01850 AL450472.2-201ENST00000603663 1156 ntBASIC16.02■□□□□ 0.16
TRBC1P01850 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.02■□□□□ 0.15
TRBC1P01850 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRBC1P01850 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBC1P01850 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBC1P01850 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
TRBC1P01850 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRBC1P01850 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBC1P01850 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBC1P01850 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBC1P01850 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBC1P01850 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TRBC1P01850 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBC1P01850 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRBC1P01850 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRBC1P01850 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRBC1P01850 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBC1P01850 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBC1P01850 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.01■□□□□ 0.15
TRBC1P01850 AL365203.3-201ENST00000609742 2057 ntBASIC16.01■□□□□ 0.15
TRBC1P01850 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRBC1P01850 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBC1P01850 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.01■□□□□ 0.15
TRBC1P01850 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRBC1P01850 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBC1P01850 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBC1P01850 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRBC1P01850 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBC1P01850 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBC1P01850 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.01■□□□□ 0.15
TRBC1P01850 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBC1P01850 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.01■□□□□ 0.15
TRBC1P01850 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.01■□□□□ 0.15
TRBC1P01850 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.01■□□□□ 0.15
TRBC1P01850 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.01■□□□□ 0.15
TRBC1P01850 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.01■□□□□ 0.15
TRBC1P01850 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.01■□□□□ 0.15
TRBC1P01850 AC009477.1-201ENST00000452936 217 ntBASIC16.01■□□□□ 0.15
TRBC1P01850 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.01■□□□□ 0.15
TRBC1P01850 RNA5SP421-201ENST00000516864 134 ntBASIC16.01■□□□□ 0.15
TRBC1P01850 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
TRBC1P01850 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.01■□□□□ 0.15
TRBC1P01850 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.01■□□□□ 0.15
TRBC1P01850 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms