Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.03■□□□□ 0.64
MBD4O95243 AC015922.1-201ENST00000421102 1152 ntBASIC19.03■□□□□ 0.64
MBD4O95243 KRT18P64-201ENST00000434946 1219 ntBASIC19.03■□□□□ 0.64
MBD4O95243 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MBD4O95243 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC19.03■□□□□ 0.64
MBD4O95243 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.03■□□□□ 0.64
MBD4O95243 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
MBD4O95243 CDK4-206ENST00000549606 558 ntTSL 2 BASIC19.03■□□□□ 0.64
MBD4O95243 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.03■□□□□ 0.64
MBD4O95243 AC023310.3-201ENST00000557027 670 ntBASIC19.03■□□□□ 0.64
MBD4O95243 AC100756.1-201ENST00000562736 682 ntBASIC19.03■□□□□ 0.64
MBD4O95243 AC138749.3-201ENST00000567691 622 ntBASIC19.03■□□□□ 0.64
MBD4O95243 AC116165.1-201ENST00000611806 668 ntBASIC19.03■□□□□ 0.64
MBD4O95243 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.03■□□□□ 0.64
MBD4O95243 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
MBD4O95243 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.03■□□□□ 0.64
MBD4O95243 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MBD4O95243 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.03■□□□□ 0.64
MBD4O95243 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MBD4O95243 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MBD4O95243 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.03■□□□□ 0.64
MBD4O95243 AL607033.1-201ENST00000623900 1599 ntBASIC19.02■□□□□ 0.64
MBD4O95243 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MBD4O95243 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MBD4O95243 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MBD4O95243 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MBD4O95243 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
MBD4O95243 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MBD4O95243 DOC2GP-204ENST00000639052 2548 ntBASIC19.02■□□□□ 0.64
MBD4O95243 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MBD4O95243 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MBD4O95243 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
MBD4O95243 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC19.02■□□□□ 0.64
MBD4O95243 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
MBD4O95243 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
MBD4O95243 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MBD4O95243 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
MBD4O95243 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.02■□□□□ 0.64
MBD4O95243 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.02■□□□□ 0.64
MBD4O95243 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.02■□□□□ 0.64
MBD4O95243 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.02■□□□□ 0.64
MBD4O95243 API5-211ENST00000534695 560 ntTSL 5 BASIC19.02■□□□□ 0.64
MBD4O95243 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.02■□□□□ 0.64
MBD4O95243 SPDYE22P-201ENST00000582158 798 ntBASIC19.02■□□□□ 0.64
MBD4O95243 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.02■□□□□ 0.64
MBD4O95243 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MBD4O95243 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MBD4O95243 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
MBD4O95243 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
MBD4O95243 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
MBD4O95243 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
MBD4O95243 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
MBD4O95243 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.02■□□□□ 0.63
MBD4O95243 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MBD4O95243 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MBD4O95243 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
MBD4O95243 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.01■□□□□ 0.63
MBD4O95243 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
MBD4O95243 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.01■□□□□ 0.63
MBD4O95243 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MBD4O95243 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MBD4O95243 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MBD4O95243 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MBD4O95243 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MBD4O95243 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.01■□□□□ 0.63
MBD4O95243 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.01■□□□□ 0.63
MBD4O95243 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC19.01■□□□□ 0.63
MBD4O95243 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MBD4O95243 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC19.01■□□□□ 0.63
MBD4O95243 TPRX2P-201ENST00000535362 881 ntBASIC19.01■□□□□ 0.63
MBD4O95243 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MBD4O95243 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
MBD4O95243 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
MBD4O95243 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.01■□□□□ 0.63
MBD4O95243 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
MBD4O95243 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.01■□□□□ 0.63
MBD4O95243 AL662799.1-202ENST00000614205 422 ntBASIC19.01■□□□□ 0.63
MBD4O95243 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC19.01■□□□□ 0.63
MBD4O95243 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MBD4O95243 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.01■□□□□ 0.63
MBD4O95243 AP003680.1-201ENST00000598970 3660 ntBASIC19.01■□□□□ 0.63
MBD4O95243 AL513523.2-202ENST00000427283 2040 ntBASIC19.01■□□□□ 0.63
MBD4O95243 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
MBD4O95243 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
MBD4O95243 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MBD4O95243 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
MBD4O95243 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
MBD4O95243 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
MBD4O95243 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
MBD4O95243 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
MBD4O95243 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
MBD4O95243 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC19.01■□□□□ 0.63
MBD4O95243 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MBD4O95243 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
MBD4O95243 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19■□□□□ 0.63
MBD4O95243 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC19■□□□□ 0.63
MBD4O95243 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19■□□□□ 0.63
MBD4O95243 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
MBD4O95243 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
MBD4O95243 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms