Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CSPG5O95196 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
CSPG5O95196 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CSPG5O95196 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSPG5O95196 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSPG5O95196 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSPG5O95196 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSPG5O95196 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSPG5O95196 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG5O95196 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG5O95196 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG5O95196 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.19■□□□□ 0.34
CSPG5O95196 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.19■□□□□ 0.34
CSPG5O95196 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG5O95196 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG5O95196 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.19■□□□□ 0.34
CSPG5O95196 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG5O95196 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CSPG5O95196 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG5O95196 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG5O95196 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG5O95196 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG5O95196 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.19■□□□□ 0.34
CSPG5O95196 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG5O95196 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CSPG5O95196 SPDYE17-201ENST00000412399 783 ntBASIC17.19■□□□□ 0.34
CSPG5O95196 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CSPG5O95196 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG5O95196 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CSPG5O95196 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.19■□□□□ 0.34
CSPG5O95196 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.19■□□□□ 0.34
CSPG5O95196 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.19■□□□□ 0.34
CSPG5O95196 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.19■□□□□ 0.34
CSPG5O95196 AC074044.1-201ENST00000609673 707 ntBASIC17.19■□□□□ 0.34
CSPG5O95196 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG5O95196 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG5O95196 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG5O95196 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.19■□□□□ 0.34
CSPG5O95196 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CSPG5O95196 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG5O95196 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CSPG5O95196 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CSPG5O95196 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG5O95196 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG5O95196 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG5O95196 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CSPG5O95196 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG5O95196 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG5O95196 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG5O95196 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.18■□□□□ 0.34
CSPG5O95196 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSPG5O95196 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.18■□□□□ 0.34
CSPG5O95196 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CSPG5O95196 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.18■□□□□ 0.34
CSPG5O95196 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CSPG5O95196 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.18■□□□□ 0.34
CSPG5O95196 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSPG5O95196 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSPG5O95196 AL603756.1-201ENST00000606511 2163 ntBASIC17.18■□□□□ 0.34
CSPG5O95196 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSPG5O95196 PDIA3P1-201ENST00000471856 1510 ntBASIC17.18■□□□□ 0.34
CSPG5O95196 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSPG5O95196 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CSPG5O95196 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSPG5O95196 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSPG5O95196 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CSPG5O95196 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSPG5O95196 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CSPG5O95196 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.18■□□□□ 0.34
CSPG5O95196 BRWD1P1-201ENST00000401091 371 ntBASIC17.18■□□□□ 0.34
CSPG5O95196 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.18■□□□□ 0.34
CSPG5O95196 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.18■□□□□ 0.34
CSPG5O95196 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.18■□□□□ 0.34
CSPG5O95196 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.18■□□□□ 0.34
CSPG5O95196 AC025048.3-201ENST00000590609 569 ntBASIC17.18■□□□□ 0.34
CSPG5O95196 LINC01115-203ENST00000606068 577 ntBASIC17.18■□□□□ 0.34
CSPG5O95196 AC005702.4-201ENST00000618393 416 ntBASIC17.18■□□□□ 0.34
CSPG5O95196 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.18■□□□□ 0.34
CSPG5O95196 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSPG5O95196 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSPG5O95196 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSPG5O95196 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSPG5O95196 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CSPG5O95196 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSPG5O95196 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CSPG5O95196 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
CSPG5O95196 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSPG5O95196 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSPG5O95196 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CSPG5O95196 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.17■□□□□ 0.34
CSPG5O95196 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CSPG5O95196 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.17■□□□□ 0.34
CSPG5O95196 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CSPG5O95196 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.17■□□□□ 0.34
CSPG5O95196 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
CSPG5O95196 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSPG5O95196 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSPG5O95196 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSPG5O95196 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
CSPG5O95196 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms