Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1BO75841 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1BO75841 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.99□□□□□ -0.17
UPK1BO75841 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1BO75841 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1BO75841 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1BO75841 U82695.1-201ENST00000635752 1889 ntBASIC13.99□□□□□ -0.17
UPK1BO75841 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.99□□□□□ -0.17
UPK1BO75841 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.99□□□□□ -0.17
UPK1BO75841 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1BO75841 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK1BO75841 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1BO75841 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
UPK1BO75841 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1BO75841 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1BO75841 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK1BO75841 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1BO75841 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK1BO75841 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.98□□□□□ -0.17
UPK1BO75841 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1BO75841 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1BO75841 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1BO75841 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.98□□□□□ -0.17
UPK1BO75841 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
UPK1BO75841 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
UPK1BO75841 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1BO75841 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1BO75841 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1BO75841 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1BO75841 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.98□□□□□ -0.17
UPK1BO75841 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.98□□□□□ -0.17
UPK1BO75841 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1BO75841 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
UPK1BO75841 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1BO75841 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.98□□□□□ -0.17
UPK1BO75841 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
UPK1BO75841 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1BO75841 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
UPK1BO75841 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1BO75841 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
UPK1BO75841 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
UPK1BO75841 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1BO75841 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC13.98□□□□□ -0.17
UPK1BO75841 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
UPK1BO75841 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC13.98□□□□□ -0.17
UPK1BO75841 AL138831.2-201ENST00000606564 490 ntBASIC13.98□□□□□ -0.17
UPK1BO75841 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
UPK1BO75841 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.98□□□□□ -0.17
UPK1BO75841 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.98□□□□□ -0.17
UPK1BO75841 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
UPK1BO75841 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
UPK1BO75841 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.98□□□□□ -0.17
UPK1BO75841 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1BO75841 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.98□□□□□ -0.17
UPK1BO75841 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.98□□□□□ -0.17
UPK1BO75841 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1BO75841 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1BO75841 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.98□□□□□ -0.17
UPK1BO75841 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1BO75841 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.98□□□□□ -0.17
UPK1BO75841 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
UPK1BO75841 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.98□□□□□ -0.17
UPK1BO75841 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.98□□□□□ -0.17
UPK1BO75841 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.98□□□□□ -0.17
UPK1BO75841 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.98□□□□□ -0.17
UPK1BO75841 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1BO75841 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
UPK1BO75841 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
UPK1BO75841 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1BO75841 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.98□□□□□ -0.17
UPK1BO75841 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1BO75841 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1BO75841 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.97□□□□□ -0.17
UPK1BO75841 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC13.97□□□□□ -0.17
UPK1BO75841 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1BO75841 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1BO75841 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
UPK1BO75841 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13.97□□□□□ -0.17
UPK1BO75841 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1BO75841 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1BO75841 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
UPK1BO75841 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.97□□□□□ -0.17
UPK1BO75841 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1BO75841 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
UPK1BO75841 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
UPK1BO75841 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1BO75841 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1BO75841 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1BO75841 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.97□□□□□ -0.17
UPK1BO75841 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1BO75841 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13.97□□□□□ -0.17
UPK1BO75841 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.97□□□□□ -0.17
UPK1BO75841 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC13.97□□□□□ -0.17
UPK1BO75841 DLX3-202ENST00000512495 834 ntTSL 2 BASIC13.97□□□□□ -0.17
UPK1BO75841 RNA5SP413-201ENST00000516373 109 ntBASIC13.97□□□□□ -0.17
UPK1BO75841 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.97□□□□□ -0.17
UPK1BO75841 CD81-212ENST00000526072 1172 ntTSL 5 BASIC13.97□□□□□ -0.17
UPK1BO75841 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1BO75841 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.97□□□□□ -0.17
UPK1BO75841 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms