Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.1■□□□□ 0.17
RFPL1O75677 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RFPL1O75677 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFPL1O75677 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFPL1O75677 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFPL1O75677 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.1■□□□□ 0.17
RFPL1O75677 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.1■□□□□ 0.17
RFPL1O75677 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.1■□□□□ 0.17
RFPL1O75677 AC092474.2-201ENST00000424288 719 ntBASIC16.1■□□□□ 0.17
RFPL1O75677 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RFPL1O75677 FAM58CP-201ENST00000435741 640 ntBASIC16.1■□□□□ 0.17
RFPL1O75677 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFPL1O75677 AP000344.2-201ENST00000512987 629 ntBASIC16.1■□□□□ 0.17
RFPL1O75677 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RFPL1O75677 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.1■□□□□ 0.17
RFPL1O75677 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.1■□□□□ 0.17
RFPL1O75677 MIR4321-201ENST00000592276 80 ntBASIC16.1■□□□□ 0.17
RFPL1O75677 AL009183.1-201ENST00000603760 355 ntBASIC16.1■□□□□ 0.17
RFPL1O75677 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.1■□□□□ 0.17
RFPL1O75677 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.1■□□□□ 0.17
RFPL1O75677 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.1■□□□□ 0.17
RFPL1O75677 AC007064.4-201ENST00000637740 555 ntBASIC16.1■□□□□ 0.17
RFPL1O75677 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RFPL1O75677 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFPL1O75677 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.1■□□□□ 0.17
RFPL1O75677 AC073439.1-201ENST00000624121 1774 ntBASIC16.1■□□□□ 0.17
RFPL1O75677 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.1■□□□□ 0.17
RFPL1O75677 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFPL1O75677 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RFPL1O75677 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFPL1O75677 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFPL1O75677 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.1■□□□□ 0.17
RFPL1O75677 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RFPL1O75677 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RFPL1O75677 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.09■□□□□ 0.17
RFPL1O75677 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFPL1O75677 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.09■□□□□ 0.17
RFPL1O75677 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFPL1O75677 AC092127.1-201ENST00000567093 3455 ntBASIC16.09■□□□□ 0.17
RFPL1O75677 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFPL1O75677 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.09■□□□□ 0.17
RFPL1O75677 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFPL1O75677 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFPL1O75677 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFPL1O75677 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFPL1O75677 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFPL1O75677 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
RFPL1O75677 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RFPL1O75677 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFPL1O75677 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RFPL1O75677 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.09■□□□□ 0.17
RFPL1O75677 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFPL1O75677 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFPL1O75677 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFPL1O75677 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RFPL1O75677 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RFPL1O75677 MIR770-201ENST00000390219 98 ntBASIC16.09■□□□□ 0.17
RFPL1O75677 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.09■□□□□ 0.17
RFPL1O75677 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.09■□□□□ 0.17
RFPL1O75677 FAM8A3P-201ENST00000427218 844 ntBASIC16.09■□□□□ 0.17
RFPL1O75677 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.09■□□□□ 0.17
RFPL1O75677 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFPL1O75677 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.09■□□□□ 0.17
RFPL1O75677 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.09■□□□□ 0.17
RFPL1O75677 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.09■□□□□ 0.17
RFPL1O75677 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFPL1O75677 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.09■□□□□ 0.17
RFPL1O75677 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.09■□□□□ 0.17
RFPL1O75677 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RFPL1O75677 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RFPL1O75677 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFPL1O75677 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFPL1O75677 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFPL1O75677 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RFPL1O75677 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.09■□□□□ 0.17
RFPL1O75677 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFPL1O75677 AC134407.2-201ENST00000625089 1978 ntBASIC16.09■□□□□ 0.17
RFPL1O75677 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.09■□□□□ 0.17
RFPL1O75677 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
RFPL1O75677 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFPL1O75677 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFPL1O75677 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFPL1O75677 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RFPL1O75677 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
RFPL1O75677 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFPL1O75677 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFPL1O75677 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFPL1O75677 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
RFPL1O75677 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.09■□□□□ 0.17
RFPL1O75677 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RFPL1O75677 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
RFPL1O75677 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RFPL1O75677 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RFPL1O75677 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
RFPL1O75677 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
RFPL1O75677 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
RFPL1O75677 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RFPL1O75677 AL136379.1-201ENST00000623471 2642 ntBASIC16.08■□□□□ 0.17
RFPL1O75677 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RFPL1O75677 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms