Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.65■□□□□ 0.26
LRCH4O75427 AC022532.1-201ENST00000624563 1728 ntBASIC16.65■□□□□ 0.26
LRCH4O75427 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.64■□□□□ 0.26
LRCH4O75427 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
LRCH4O75427 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.64■□□□□ 0.25
LRCH4O75427 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRCH4O75427 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.64■□□□□ 0.25
LRCH4O75427 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRCH4O75427 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRCH4O75427 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRCH4O75427 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.64■□□□□ 0.25
LRCH4O75427 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRCH4O75427 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRCH4O75427 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.64■□□□□ 0.25
LRCH4O75427 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRCH4O75427 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRCH4O75427 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRCH4O75427 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.64■□□□□ 0.25
LRCH4O75427 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.64■□□□□ 0.25
LRCH4O75427 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRCH4O75427 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LRCH4O75427 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.64■□□□□ 0.25
LRCH4O75427 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRCH4O75427 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.64■□□□□ 0.25
LRCH4O75427 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.64■□□□□ 0.25
LRCH4O75427 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
LRCH4O75427 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.64■□□□□ 0.25
LRCH4O75427 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
LRCH4O75427 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.64■□□□□ 0.25
LRCH4O75427 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.64■□□□□ 0.25
LRCH4O75427 AL133215.2-201ENST00000609242 977 ntBASIC16.64■□□□□ 0.25
LRCH4O75427 AC003101.2-201ENST00000612557 442 ntBASIC16.64■□□□□ 0.25
LRCH4O75427 AC007967.4-201ENST00000614700 386 ntBASIC16.64■□□□□ 0.25
LRCH4O75427 AC009090.5-201ENST00000624886 2285 ntBASIC16.64■□□□□ 0.25
LRCH4O75427 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.64■□□□□ 0.25
LRCH4O75427 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
LRCH4O75427 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.64■□□□□ 0.25
LRCH4O75427 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LRCH4O75427 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.64■□□□□ 0.25
LRCH4O75427 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
LRCH4O75427 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRCH4O75427 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRCH4O75427 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRCH4O75427 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.64■□□□□ 0.25
LRCH4O75427 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LRCH4O75427 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRCH4O75427 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRCH4O75427 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.63■□□□□ 0.25
LRCH4O75427 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH4O75427 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH4O75427 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH4O75427 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH4O75427 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.63■□□□□ 0.25
LRCH4O75427 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.63■□□□□ 0.25
LRCH4O75427 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.63■□□□□ 0.25
LRCH4O75427 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LRCH4O75427 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH4O75427 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH4O75427 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH4O75427 AC090616.6-203ENST00000579186 1945 ntBASIC16.63■□□□□ 0.25
LRCH4O75427 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH4O75427 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
LRCH4O75427 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH4O75427 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH4O75427 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.63■□□□□ 0.25
LRCH4O75427 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.63■□□□□ 0.25
LRCH4O75427 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.63■□□□□ 0.25
LRCH4O75427 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH4O75427 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.63■□□□□ 0.25
LRCH4O75427 PHKG1P2-201ENST00000457537 863 ntBASIC16.63■□□□□ 0.25
LRCH4O75427 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH4O75427 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH4O75427 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH4O75427 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.63■□□□□ 0.25
LRCH4O75427 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.63■□□□□ 0.25
LRCH4O75427 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.63■□□□□ 0.25
LRCH4O75427 AP001059.3-201ENST00000619053 235 ntBASIC16.63■□□□□ 0.25
LRCH4O75427 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.63■□□□□ 0.25
LRCH4O75427 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH4O75427 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.63■□□□□ 0.25
LRCH4O75427 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
LRCH4O75427 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH4O75427 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH4O75427 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.63■□□□□ 0.25
LRCH4O75427 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.63■□□□□ 0.25
LRCH4O75427 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
LRCH4O75427 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
LRCH4O75427 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH4O75427 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH4O75427 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH4O75427 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.63■□□□□ 0.25
LRCH4O75427 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH4O75427 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.63■□□□□ 0.25
LRCH4O75427 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH4O75427 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.62■□□□□ 0.25
LRCH4O75427 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH4O75427 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH4O75427 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LRCH4O75427 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.62■□□□□ 0.25
LRCH4O75427 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms