Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CHMP2AO43633 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP2AO43633 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP2AO43633 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP2AO43633 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP2AO43633 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP2AO43633 HIST3H2BA-201ENST00000436555 524 ntBASIC18■□□□□ 0.47
CHMP2AO43633 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP2AO43633 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CHMP2AO43633 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP2AO43633 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CHMP2AO43633 RN7SL204P-201ENST00000582831 262 ntBASIC18■□□□□ 0.47
CHMP2AO43633 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18■□□□□ 0.47
CHMP2AO43633 MIR6069-201ENST00000620069 79 ntBASIC18■□□□□ 0.47
CHMP2AO43633 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18■□□□□ 0.47
CHMP2AO43633 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18■□□□□ 0.47
CHMP2AO43633 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP2AO43633 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CHMP2AO43633 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CHMP2AO43633 AC018892.3-201ENST00000623986 2499 ntBASIC18■□□□□ 0.47
CHMP2AO43633 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18■□□□□ 0.47
CHMP2AO43633 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP2AO43633 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CHMP2AO43633 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
CHMP2AO43633 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP2AO43633 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP2AO43633 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18■□□□□ 0.47
CHMP2AO43633 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CHMP2AO43633 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18■□□□□ 0.47
CHMP2AO43633 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18■□□□□ 0.47
CHMP2AO43633 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18■□□□□ 0.47
CHMP2AO43633 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP2AO43633 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP2AO43633 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2AO43633 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CHMP2AO43633 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.99■□□□□ 0.47
CHMP2AO43633 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.99■□□□□ 0.47
CHMP2AO43633 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.99■□□□□ 0.47
CHMP2AO43633 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2AO43633 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.99■□□□□ 0.47
CHMP2AO43633 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.99■□□□□ 0.47
CHMP2AO43633 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.99■□□□□ 0.47
CHMP2AO43633 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.99■□□□□ 0.47
CHMP2AO43633 AC002472.2-201ENST00000442739 958 ntBASIC17.99■□□□□ 0.47
CHMP2AO43633 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.99■□□□□ 0.47
CHMP2AO43633 SERBP1P5-201ENST00000510079 1181 ntBASIC17.99■□□□□ 0.47
CHMP2AO43633 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.99■□□□□ 0.47
CHMP2AO43633 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.99■□□□□ 0.47
CHMP2AO43633 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.99■□□□□ 0.47
CHMP2AO43633 MIR3197-201ENST00000582241 73 ntBASIC17.99■□□□□ 0.47
CHMP2AO43633 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.99■□□□□ 0.47
CHMP2AO43633 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.99■□□□□ 0.47
CHMP2AO43633 AC004840.1-201ENST00000636359 365 ntBASIC17.99■□□□□ 0.47
CHMP2AO43633 AL109936.8-201ENST00000641772 604 ntBASIC17.99■□□□□ 0.47
CHMP2AO43633 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2AO43633 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2AO43633 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2AO43633 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CHMP2AO43633 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CHMP2AO43633 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.99■□□□□ 0.47
CHMP2AO43633 AC010491.1-201ENST00000563101 2797 ntBASIC17.99■□□□□ 0.47
CHMP2AO43633 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.99■□□□□ 0.47
CHMP2AO43633 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2AO43633 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2AO43633 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2AO43633 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.99■□□□□ 0.47
CHMP2AO43633 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.99■□□□□ 0.47
CHMP2AO43633 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.99■□□□□ 0.47
CHMP2AO43633 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CHMP2AO43633 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2AO43633 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2AO43633 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2AO43633 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2AO43633 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2AO43633 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2AO43633 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CHMP2AO43633 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP2AO43633 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP2AO43633 AC018695.7-201ENST00000624587 2492 ntBASIC17.98■□□□□ 0.47
CHMP2AO43633 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.98■□□□□ 0.47
CHMP2AO43633 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP2AO43633 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP2AO43633 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP2AO43633 DOC2GP-204ENST00000639052 2548 ntBASIC17.98■□□□□ 0.47
CHMP2AO43633 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.98■□□□□ 0.47
CHMP2AO43633 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP2AO43633 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
CHMP2AO43633 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.98■□□□□ 0.47
CHMP2AO43633 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.98■□□□□ 0.47
CHMP2AO43633 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.98■□□□□ 0.47
CHMP2AO43633 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.98■□□□□ 0.47
CHMP2AO43633 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.98■□□□□ 0.47
CHMP2AO43633 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.98■□□□□ 0.47
CHMP2AO43633 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP2AO43633 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.98■□□□□ 0.47
CHMP2AO43633 AC135586.1-201ENST00000539323 574 ntBASIC17.98■□□□□ 0.47
CHMP2AO43633 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
CHMP2AO43633 LINC02560-201ENST00000596379 459 ntBASIC17.98■□□□□ 0.47
CHMP2AO43633 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.98■□□□□ 0.47
CHMP2AO43633 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms