Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.26□□□□□ -0.13
SGCEO43556 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SGCEO43556 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.26□□□□□ -0.13
SGCEO43556 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SGCEO43556 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SGCEO43556 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.26□□□□□ -0.13
SGCEO43556 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.26□□□□□ -0.13
SGCEO43556 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
SGCEO43556 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SGCEO43556 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SGCEO43556 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.26□□□□□ -0.13
SGCEO43556 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.26□□□□□ -0.13
SGCEO43556 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SGCEO43556 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SGCEO43556 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
SGCEO43556 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SGCEO43556 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SGCEO43556 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SGCEO43556 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.26□□□□□ -0.13
SGCEO43556 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.26□□□□□ -0.13
SGCEO43556 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SGCEO43556 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.26□□□□□ -0.13
SGCEO43556 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.26□□□□□ -0.13
SGCEO43556 ACTG1P14-201ENST00000446382 1122 ntBASIC14.26□□□□□ -0.13
SGCEO43556 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.26□□□□□ -0.13
SGCEO43556 AC105233.2-201ENST00000523697 349 ntBASIC14.26□□□□□ -0.13
SGCEO43556 AF228730.5-201ENST00000530288 346 ntBASIC14.26□□□□□ -0.13
SGCEO43556 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.26□□□□□ -0.13
SGCEO43556 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.26□□□□□ -0.13
SGCEO43556 AL671883.3-201ENST00000603274 991 ntBASIC14.26□□□□□ -0.13
SGCEO43556 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.26□□□□□ -0.13
SGCEO43556 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.26□□□□□ -0.13
SGCEO43556 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
SGCEO43556 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SGCEO43556 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SGCEO43556 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
SGCEO43556 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SGCEO43556 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SGCEO43556 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SGCEO43556 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
SGCEO43556 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SGCEO43556 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SGCEO43556 AL603832.2-201ENST00000566195 2125 ntBASIC14.26□□□□□ -0.13
SGCEO43556 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.26□□□□□ -0.13
SGCEO43556 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SGCEO43556 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SGCEO43556 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SGCEO43556 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SGCEO43556 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SGCEO43556 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.25□□□□□ -0.13
SGCEO43556 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.25□□□□□ -0.13
SGCEO43556 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SGCEO43556 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SGCEO43556 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SGCEO43556 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SGCEO43556 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SGCEO43556 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SGCEO43556 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SGCEO43556 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SGCEO43556 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SGCEO43556 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SGCEO43556 AP000347.1-202ENST00000435868 847 ntBASIC14.25□□□□□ -0.13
SGCEO43556 MKNK2P1-201ENST00000437526 628 ntBASIC14.25□□□□□ -0.13
SGCEO43556 SPDYE11-202ENST00000450699 704 ntBASIC14.25□□□□□ -0.13
SGCEO43556 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.25□□□□□ -0.13
SGCEO43556 SPDYE9P-201ENST00000570642 692 ntBASIC14.25□□□□□ -0.13
SGCEO43556 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.25□□□□□ -0.13
SGCEO43556 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.25□□□□□ -0.13
SGCEO43556 SPDYE10P-202ENST00000612005 668 ntBASIC14.25□□□□□ -0.13
SGCEO43556 SPDYE8P-202ENST00000612377 668 ntBASIC14.25□□□□□ -0.13
SGCEO43556 AC008267.7-201ENST00000624570 1194 ntBASIC14.25□□□□□ -0.13
SGCEO43556 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SGCEO43556 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SGCEO43556 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SGCEO43556 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SGCEO43556 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SGCEO43556 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.25□□□□□ -0.13
SGCEO43556 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SGCEO43556 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SGCEO43556 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SGCEO43556 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SGCEO43556 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SGCEO43556 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SGCEO43556 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SGCEO43556 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.25□□□□□ -0.13
SGCEO43556 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SGCEO43556 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SGCEO43556 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SGCEO43556 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.25□□□□□ -0.13
SGCEO43556 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SGCEO43556 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SGCEO43556 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.25□□□□□ -0.13
SGCEO43556 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.25□□□□□ -0.13
SGCEO43556 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SGCEO43556 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SGCEO43556 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.24□□□□□ -0.13
SGCEO43556 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SGCEO43556 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SGCEO43556 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.24□□□□□ -0.13
SGCEO43556 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms