Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC22.42■■□□□ 1.18
MSH5O43196 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
MSH5O43196 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC22.42■■□□□ 1.18
MSH5O43196 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
MSH5O43196 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
MSH5O43196 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
MSH5O43196 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC22.41■■□□□ 1.18
MSH5O43196 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MSH5O43196 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
MSH5O43196 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
MSH5O43196 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MSH5O43196 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC22.41■■□□□ 1.18
MSH5O43196 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
MSH5O43196 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MSH5O43196 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MSH5O43196 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
MSH5O43196 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MSH5O43196 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC22.41■■□□□ 1.18
MSH5O43196 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MSH5O43196 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
MSH5O43196 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
MSH5O43196 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
MSH5O43196 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MSH5O43196 TGIF1-203ENST00000345133 1088 ntTSL 3 BASIC22.41■■□□□ 1.18
MSH5O43196 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
MSH5O43196 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC22.41■■□□□ 1.18
MSH5O43196 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC22.41■■□□□ 1.18
MSH5O43196 LYSMD4-203ENST00000378904 2122 ntBASIC22.41■■□□□ 1.18
MSH5O43196 HNRNPFP1-201ENST00000391730 1133 ntBASIC22.41■■□□□ 1.18
MSH5O43196 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MSH5O43196 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC22.41■■□□□ 1.18
MSH5O43196 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC22.41■■□□□ 1.18
MSH5O43196 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
MSH5O43196 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MSH5O43196 C3orf52-204ENST00000480282 1080 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
MSH5O43196 S100A2-206ENST00000497140 697 ntTSL 2 BASIC22.41■■□□□ 1.18
MSH5O43196 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
MSH5O43196 AC106806.2-201ENST00000509365 500 ntBASIC22.41■■□□□ 1.18
MSH5O43196 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
MSH5O43196 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC22.41■■□□□ 1.18
MSH5O43196 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC22.41■■□□□ 1.18
MSH5O43196 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
MSH5O43196 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MSH5O43196 AL360169.2-201ENST00000619713 561 ntTSL 5 BASIC22.41■■□□□ 1.18
MSH5O43196 AL162233.1-201ENST00000620014 944 ntBASIC22.41■■□□□ 1.18
MSH5O43196 PAUPAR-201ENST00000630360 2965 ntBASIC22.41■■□□□ 1.18
MSH5O43196 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
MSH5O43196 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MSH5O43196 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
MSH5O43196 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
MSH5O43196 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
MSH5O43196 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MSH5O43196 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MSH5O43196 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC22.41■■□□□ 1.18
MSH5O43196 AC073544.1-201ENST00000600110 1595 ntBASIC22.41■■□□□ 1.18
MSH5O43196 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
MSH5O43196 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
MSH5O43196 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC22.41■■□□□ 1.18
MSH5O43196 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
MSH5O43196 AC120036.2-201ENST00000509729 1474 ntBASIC22.41■■□□□ 1.18
MSH5O43196 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
MSH5O43196 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
MSH5O43196 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC22.4■■□□□ 1.18
MSH5O43196 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
MSH5O43196 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC22.4■■□□□ 1.18
MSH5O43196 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
MSH5O43196 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC22.4■■□□□ 1.18
MSH5O43196 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC22.4■■□□□ 1.18
MSH5O43196 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MSH5O43196 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC22.4■■□□□ 1.18
MSH5O43196 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
MSH5O43196 AL031667.1-201ENST00000440222 725 ntBASIC22.4■■□□□ 1.18
MSH5O43196 ELOCP30-201ENST00000447108 299 ntBASIC22.4■■□□□ 1.18
MSH5O43196 PON3-205ENST00000451904 1053 ntTSL 3 BASIC22.4■■□□□ 1.18
MSH5O43196 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC22.4■■□□□ 1.18
MSH5O43196 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC22.4■■□□□ 1.18
MSH5O43196 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC22.4■■□□□ 1.18
MSH5O43196 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC22.4■■□□□ 1.18
MSH5O43196 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC22.4■■□□□ 1.18
MSH5O43196 ATP6V1D-209ENST00000555431 1085 ntTSL 5 BASIC22.4■■□□□ 1.18
MSH5O43196 AC023141.13-201ENST00000604991 943 ntBASIC22.4■■□□□ 1.18
MSH5O43196 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC22.4■■□□□ 1.18
MSH5O43196 AC104113.1-201ENST00000607723 479 ntBASIC22.4■■□□□ 1.18
MSH5O43196 AL354696.1-201ENST00000614652 497 ntBASIC22.4■■□□□ 1.18
MSH5O43196 AC021766.1-201ENST00000624404 741 ntBASIC22.4■■□□□ 1.18
MSH5O43196 AC007064.4-201ENST00000637740 555 ntBASIC22.4■■□□□ 1.18
MSH5O43196 AC092902.6-201ENST00000641783 218 ntBASIC22.4■■□□□ 1.18
MSH5O43196 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC22.4■■□□□ 1.18
MSH5O43196 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
MSH5O43196 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC22.4■■□□□ 1.18
MSH5O43196 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC22.4■■□□□ 1.18
MSH5O43196 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MSH5O43196 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
MSH5O43196 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC22.39■■□□□ 1.18
MSH5O43196 AC132938.6-201ENST00000623828 1655 ntBASIC22.39■■□□□ 1.18
MSH5O43196 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC22.39■■□□□ 1.18
MSH5O43196 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
MSH5O43196 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
MSH5O43196 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
MSH5O43196 ADM-208ENST00000534464 1640 ntTSL 2 BASIC22.39■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms