Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC19.06■□□□□ 0.64
FOXN1O15353 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC19.06■□□□□ 0.64
FOXN1O15353 AP000812.2-201ENST00000538934 718 ntBASIC19.06■□□□□ 0.64
FOXN1O15353 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC19.06■□□□□ 0.64
FOXN1O15353 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC19.06■□□□□ 0.64
FOXN1O15353 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
FOXN1O15353 ABBA01031660.1-201ENST00000635219 756 ntBASIC19.06■□□□□ 0.64
FOXN1O15353 AL033527.5-202ENST00000641632 1098 ntBASIC19.06■□□□□ 0.64
FOXN1O15353 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN1O15353 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.06■□□□□ 0.64
FOXN1O15353 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
FOXN1O15353 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
FOXN1O15353 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
FOXN1O15353 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN1O15353 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN1O15353 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN1O15353 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN1O15353 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.06■□□□□ 0.64
FOXN1O15353 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN1O15353 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN1O15353 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
FOXN1O15353 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN1O15353 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.05■□□□□ 0.64
FOXN1O15353 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.05■□□□□ 0.64
FOXN1O15353 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
FOXN1O15353 TUBB8P12-201ENST00000308911 1335 ntBASIC19.05■□□□□ 0.64
FOXN1O15353 TUBB7P-202ENST00000428444 1305 ntBASIC19.05■□□□□ 0.64
FOXN1O15353 TUBB8P7-204ENST00000567960 1332 ntBASIC19.05■□□□□ 0.64
FOXN1O15353 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
FOXN1O15353 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN1O15353 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN1O15353 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN1O15353 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN1O15353 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN1O15353 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
FOXN1O15353 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.05■□□□□ 0.64
FOXN1O15353 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN1O15353 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.05■□□□□ 0.64
FOXN1O15353 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN1O15353 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN1O15353 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
FOXN1O15353 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN1O15353 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.05■□□□□ 0.64
FOXN1O15353 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC19.05■□□□□ 0.64
FOXN1O15353 AC005077.2-201ENST00000449786 690 ntBASIC19.05■□□□□ 0.64
FOXN1O15353 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC19.05■□□□□ 0.64
FOXN1O15353 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.05■□□□□ 0.64
FOXN1O15353 AC104596.2-201ENST00000512793 793 ntBASIC19.05■□□□□ 0.64
FOXN1O15353 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC19.05■□□□□ 0.64
FOXN1O15353 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
FOXN1O15353 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC19.05■□□□□ 0.64
FOXN1O15353 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN1O15353 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
FOXN1O15353 OR6D1P-202ENST00000641007 5290 ntBASIC19.05■□□□□ 0.64
FOXN1O15353 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
FOXN1O15353 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
FOXN1O15353 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN1O15353 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.05■□□□□ 0.64
FOXN1O15353 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN1O15353 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN1O15353 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN1O15353 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN1O15353 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN1O15353 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN1O15353 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
FOXN1O15353 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
FOXN1O15353 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN1O15353 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN1O15353 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN1O15353 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN1O15353 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN1O15353 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN1O15353 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
FOXN1O15353 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN1O15353 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN1O15353 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.04■□□□□ 0.64
FOXN1O15353 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN1O15353 AC114501.1-201ENST00000445949 172 ntBASIC19.04■□□□□ 0.64
FOXN1O15353 TDH-203ENST00000531764 1110 ntBASIC19.04■□□□□ 0.64
FOXN1O15353 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC19.04■□□□□ 0.64
FOXN1O15353 AC025048.3-201ENST00000590609 569 ntBASIC19.04■□□□□ 0.64
FOXN1O15353 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
FOXN1O15353 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.04■□□□□ 0.64
FOXN1O15353 AC244452.3-201ENST00000636814 210 ntBASIC19.04■□□□□ 0.64
FOXN1O15353 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.04■□□□□ 0.64
FOXN1O15353 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.04■□□□□ 0.64
FOXN1O15353 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
FOXN1O15353 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN1O15353 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN1O15353 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
FOXN1O15353 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN1O15353 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN1O15353 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC19.04■□□□□ 0.64
FOXN1O15353 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN1O15353 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN1O15353 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.03■□□□□ 0.64
FOXN1O15353 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN1O15353 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
FOXN1O15353 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN1O15353 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms