Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.21■□□□□ 0.02
UPK1AO00322 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
UPK1AO00322 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.21■□□□□ 0.02
UPK1AO00322 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
UPK1AO00322 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.21■□□□□ 0.02
UPK1AO00322 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
UPK1AO00322 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
UPK1AO00322 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK1AO00322 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK1AO00322 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK1AO00322 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK1AO00322 CICP13-201ENST00000422015 2789 ntBASIC15.2■□□□□ 0.02
UPK1AO00322 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
UPK1AO00322 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
UPK1AO00322 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
UPK1AO00322 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.2■□□□□ 0.02
UPK1AO00322 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
UPK1AO00322 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
UPK1AO00322 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.2■□□□□ 0.02
UPK1AO00322 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK1AO00322 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.2■□□□□ 0.02
UPK1AO00322 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK1AO00322 AC106881.1-201ENST00000605849 3329 ntBASIC15.2■□□□□ 0.02
UPK1AO00322 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK1AO00322 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK1AO00322 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK1AO00322 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK1AO00322 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK1AO00322 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.2■□□□□ 0.02
UPK1AO00322 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.2■□□□□ 0.02
UPK1AO00322 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.2■□□□□ 0.02
UPK1AO00322 SPDYE11-202ENST00000450699 704 ntBASIC15.2■□□□□ 0.02
UPK1AO00322 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
UPK1AO00322 AC098859.1-201ENST00000502915 1238 ntBASIC15.2■□□□□ 0.02
UPK1AO00322 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.2■□□□□ 0.02
UPK1AO00322 SPDYE9P-201ENST00000570642 692 ntBASIC15.2■□□□□ 0.02
UPK1AO00322 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
UPK1AO00322 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.2■□□□□ 0.02
UPK1AO00322 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.2■□□□□ 0.02
UPK1AO00322 SPDYE10P-202ENST00000612005 668 ntBASIC15.2■□□□□ 0.02
UPK1AO00322 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
UPK1AO00322 SPDYE8P-202ENST00000612377 668 ntBASIC15.2■□□□□ 0.02
UPK1AO00322 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.2■□□□□ 0.02
UPK1AO00322 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.2■□□□□ 0.02
UPK1AO00322 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK1AO00322 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
UPK1AO00322 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
UPK1AO00322 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK1AO00322 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK1AO00322 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
UPK1AO00322 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.2■□□□□ 0.02
UPK1AO00322 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK1AO00322 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.2■□□□□ 0.02
UPK1AO00322 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
UPK1AO00322 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK1AO00322 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK1AO00322 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
UPK1AO00322 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.2■□□□□ 0.02
UPK1AO00322 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK1AO00322 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK1AO00322 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.2■□□□□ 0.02
UPK1AO00322 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
UPK1AO00322 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK1AO00322 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
UPK1AO00322 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
UPK1AO00322 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UPK1AO00322 SNX18-202ENST00000343017 3140 ntBASIC15.19■□□□□ 0.02
UPK1AO00322 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
UPK1AO00322 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UPK1AO00322 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.19■□□□□ 0.02
UPK1AO00322 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UPK1AO00322 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UPK1AO00322 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
UPK1AO00322 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.19■□□□□ 0.02
UPK1AO00322 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
UPK1AO00322 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.19■□□□□ 0.02
UPK1AO00322 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UPK1AO00322 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UPK1AO00322 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.19■□□□□ 0.02
UPK1AO00322 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.19■□□□□ 0.02
UPK1AO00322 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
UPK1AO00322 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UPK1AO00322 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UPK1AO00322 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.19■□□□□ 0.02
UPK1AO00322 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.19■□□□□ 0.02
UPK1AO00322 SPCS2P4-201ENST00000436160 681 ntBASIC15.19■□□□□ 0.02
UPK1AO00322 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.19■□□□□ 0.02
UPK1AO00322 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.19■□□□□ 0.02
UPK1AO00322 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.19■□□□□ 0.02
UPK1AO00322 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.19■□□□□ 0.02
UPK1AO00322 AC079140.1-201ENST00000508039 487 ntBASIC15.19■□□□□ 0.02
UPK1AO00322 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.19■□□□□ 0.02
UPK1AO00322 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.19■□□□□ 0.02
UPK1AO00322 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.19■□□□□ 0.02
UPK1AO00322 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.19■□□□□ 0.02
UPK1AO00322 LINC01225-203ENST00000563550 1244 ntBASIC15.19■□□□□ 0.02
UPK1AO00322 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.19■□□□□ 0.02
UPK1AO00322 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
UPK1AO00322 MIR4321-201ENST00000592276 80 ntBASIC15.19■□□□□ 0.02
UPK1AO00322 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms