Protein–RNA interactions for Protein: O00192

ARVCF, Armadillo repeat protein deleted in velo-cardio-facial syndrome, humanhuman

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARVCFO00192 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
ARVCFO00192 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.38■□□□□ 0.37
ARVCFO00192 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ARVCFO00192 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ARVCFO00192 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ARVCFO00192 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ARVCFO00192 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ARVCFO00192 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ARVCFO00192 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.38■□□□□ 0.37
ARVCFO00192 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.38■□□□□ 0.37
ARVCFO00192 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.38■□□□□ 0.37
ARVCFO00192 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ARVCFO00192 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ARVCFO00192 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ARVCFO00192 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ARVCFO00192 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ARVCFO00192 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.37■□□□□ 0.37
ARVCFO00192 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
ARVCFO00192 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ARVCFO00192 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
ARVCFO00192 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ARVCFO00192 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ARVCFO00192 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ARVCFO00192 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ARVCFO00192 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
ARVCFO00192 Z93015.1-201ENST00000451718 390 ntBASIC17.37■□□□□ 0.37
ARVCFO00192 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.37■□□□□ 0.37
ARVCFO00192 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ARVCFO00192 AP001582.1-201ENST00000525856 295 ntBASIC17.37■□□□□ 0.37
ARVCFO00192 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.37■□□□□ 0.37
ARVCFO00192 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ARVCFO00192 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.37■□□□□ 0.37
ARVCFO00192 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.37■□□□□ 0.37
ARVCFO00192 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.37■□□□□ 0.37
ARVCFO00192 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.37■□□□□ 0.37
ARVCFO00192 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.37■□□□□ 0.37
ARVCFO00192 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.37■□□□□ 0.37
ARVCFO00192 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ARVCFO00192 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ARVCFO00192 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.37■□□□□ 0.37
ARVCFO00192 AC020916.1-201ENST00000587762 1774 ntBASIC17.37■□□□□ 0.37
ARVCFO00192 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.37■□□□□ 0.37
ARVCFO00192 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ARVCFO00192 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ARVCFO00192 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ARVCFO00192 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ARVCFO00192 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ARVCFO00192 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.37■□□□□ 0.37
ARVCFO00192 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ARVCFO00192 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.36■□□□□ 0.37
ARVCFO00192 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARVCFO00192 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARVCFO00192 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARVCFO00192 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARVCFO00192 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARVCFO00192 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.36■□□□□ 0.37
ARVCFO00192 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARVCFO00192 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.36■□□□□ 0.37
ARVCFO00192 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARVCFO00192 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARVCFO00192 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARVCFO00192 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARVCFO00192 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ARVCFO00192 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.36■□□□□ 0.37
ARVCFO00192 SLC25A24P2-201ENST00000415059 510 ntBASIC17.36■□□□□ 0.37
ARVCFO00192 FAM197Y7-201ENST00000432892 766 ntBASIC17.36■□□□□ 0.37
ARVCFO00192 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.36■□□□□ 0.37
ARVCFO00192 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.36■□□□□ 0.37
ARVCFO00192 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.36■□□□□ 0.37
ARVCFO00192 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ARVCFO00192 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ARVCFO00192 AC078819.1-201ENST00000547454 765 ntBASIC17.36■□□□□ 0.37
ARVCFO00192 AC012085.1-201ENST00000548270 765 ntBASIC17.36■□□□□ 0.37
ARVCFO00192 AC107373.2-201ENST00000607735 490 ntBASIC17.36■□□□□ 0.37
ARVCFO00192 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ARVCFO00192 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.36■□□□□ 0.37
ARVCFO00192 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
ARVCFO00192 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ARVCFO00192 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARVCFO00192 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARVCFO00192 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARVCFO00192 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARVCFO00192 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARVCFO00192 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARVCFO00192 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARVCFO00192 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.36■□□□□ 0.37
ARVCFO00192 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARVCFO00192 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.36■□□□□ 0.37
ARVCFO00192 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARVCFO00192 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ARVCFO00192 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARVCFO00192 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARVCFO00192 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ARVCFO00192 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ARVCFO00192 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARVCFO00192 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARVCFO00192 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARVCFO00192 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.35■□□□□ 0.37
ARVCFO00192 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARVCFO00192 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms