Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 AC009407.1-201ENST00000568958 598 ntBASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 REXO1L8P-201ENST00000604378 1897 ntBASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 AC026979.3-201ENST00000607315 403 ntBASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 AL844908.2-201ENST00000609461 460 ntBASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 AC008738.7-201ENST00000609744 511 ntBASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 AC006449.6-201ENST00000612330 2296 ntBASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA2E9PIF3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 AL080243.2-201ENST00000418783 582 ntBASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 RN7SL618P-201ENST00000477850 296 ntBASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 AP005018.1-201ENST00000525475 301 ntBASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 AC061975.2-201ENST00000581722 295 ntBASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 AL662799.1-202ENST00000614205 422 ntBASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA2E9PIF3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 PCDH8P1-201ENST00000428983 2773 ntBASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA2E9PIF3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms