Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 CMC1-204ENST00000423894 549 ntTSL 2 BASIC19.7■□□□□ 0.74
RGPD3A6NKT7 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RGPD3A6NKT7 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC19.7■□□□□ 0.74
RGPD3A6NKT7 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
RGPD3A6NKT7 AL132994.2-201ENST00000603120 687 ntBASIC19.7■□□□□ 0.74
RGPD3A6NKT7 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC19.7■□□□□ 0.74
RGPD3A6NKT7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RGPD3A6NKT7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RGPD3A6NKT7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
RGPD3A6NKT7 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RGPD3A6NKT7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.69■□□□□ 0.74
RGPD3A6NKT7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.69■□□□□ 0.74
RGPD3A6NKT7 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RGPD3A6NKT7 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RGPD3A6NKT7 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RGPD3A6NKT7 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RGPD3A6NKT7 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RGPD3A6NKT7 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RGPD3A6NKT7 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RGPD3A6NKT7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.69■□□□□ 0.74
RGPD3A6NKT7 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC19.69■□□□□ 0.74
RGPD3A6NKT7 AC021723.1-201ENST00000486306 515 ntBASIC19.69■□□□□ 0.74
RGPD3A6NKT7 RN7SL67P-201ENST00000492147 296 ntBASIC19.69■□□□□ 0.74
RGPD3A6NKT7 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC19.69■□□□□ 0.74
RGPD3A6NKT7 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC19.69■□□□□ 0.74
RGPD3A6NKT7 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC19.69■□□□□ 0.74
RGPD3A6NKT7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.69■□□□□ 0.74
RGPD3A6NKT7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RGPD3A6NKT7 CYP51A1P3-201ENST00000400072 1428 ntBASIC19.69■□□□□ 0.74
RGPD3A6NKT7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.69■□□□□ 0.74
RGPD3A6NKT7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.69■□□□□ 0.74
RGPD3A6NKT7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RGPD3A6NKT7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RGPD3A6NKT7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RGPD3A6NKT7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.68■□□□□ 0.74
RGPD3A6NKT7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RGPD3A6NKT7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RGPD3A6NKT7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RGPD3A6NKT7 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RGPD3A6NKT7 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC19.68■□□□□ 0.74
RGPD3A6NKT7 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC19.68■□□□□ 0.74
RGPD3A6NKT7 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC19.68■□□□□ 0.74
RGPD3A6NKT7 AC004923.1-202ENST00000642106 209 ntBASIC19.68■□□□□ 0.74
RGPD3A6NKT7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RGPD3A6NKT7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RGPD3A6NKT7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.68■□□□□ 0.74
RGPD3A6NKT7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.68■□□□□ 0.74
RGPD3A6NKT7 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC19.68■□□□□ 0.74
RGPD3A6NKT7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RGPD3A6NKT7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RGPD3A6NKT7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.68■□□□□ 0.74
RGPD3A6NKT7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.68■□□□□ 0.74
RGPD3A6NKT7 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RGPD3A6NKT7 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 TUBB8P8-201ENST00000458717 1058 ntBASIC19.67■□□□□ 0.74
RGPD3A6NKT7 AC010234.1-201ENST00000494599 870 ntBASIC19.67■□□□□ 0.74
RGPD3A6NKT7 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 RPL35-206ENST00000629845 340 ntTSL 5 BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 AC074138.1-201ENST00000611182 1303 ntBASIC19.67■□□□□ 0.74
RGPD3A6NKT7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 RN7SKP175-201ENST00000408472 289 ntBASIC19.67■□□□□ 0.74
RGPD3A6NKT7 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 TMCO5B-205ENST00000530020 894 ntBASIC19.67■□□□□ 0.74
RGPD3A6NKT7 AL031713.1-201ENST00000564813 661 ntBASIC19.67■□□□□ 0.74
RGPD3A6NKT7 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RGPD3A6NKT7 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC19.66■□□□□ 0.74
RGPD3A6NKT7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.66■□□□□ 0.74
RGPD3A6NKT7 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RGPD3A6NKT7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.66■□□□□ 0.74
RGPD3A6NKT7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.66■□□□□ 0.74
RGPD3A6NKT7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RGPD3A6NKT7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.66■□□□□ 0.74
RGPD3A6NKT7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RGPD3A6NKT7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms