Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 AC090616.6-203ENST00000579186 1945 ntBASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 SNX18-202ENST00000343017 3140 ntBASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 MRPL20P1-201ENST00000400819 433 ntBASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 TSPY19P-201ENST00000418461 509 ntBASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 TSPY18P-201ENST00000441642 509 ntBASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 AC004790.2-201ENST00000623588 572 ntBASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 TCAF2P1-201ENST00000291129 2421 ntBASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV5A0A0B4J249 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 AC105250.1-201ENST00000509378 2057 ntBASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 FAM185BP-201ENST00000443595 716 ntBASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 AC093724.1-201ENST00000448659 1027 ntBASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 KRT18P35-201ENST00000510488 1269 ntBASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 CLEC4GP1-201ENST00000596555 870 ntBASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 MIR1199-201ENST00000621445 119 ntBASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms