Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 AC067930.6-201ENST00000623257 4947 ntBASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 KRT8P37-201ENST00000451609 1420 ntBASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 MEIS3P1-201ENST00000495167 958 ntBASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTDP1Q9Y5B0 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 AL512384.1-201ENST00000406683 331 ntBASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 GIMAP3P-201ENST00000495150 836 ntBASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 WASH4P-201ENST00000564273 1246 ntBASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 AC093726.1-201ENST00000608064 963 ntBASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 AL008721.1-201ENST00000609964 604 ntBASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
CTDP1Q9Y5B0 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 AC005052.1-201ENST00000625181 2492 ntBASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.47■□□□□ 0.55
CTDP1Q9Y5B0 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms