Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HDGFL3Q9Y3E1 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 KRT8P37-201ENST00000451609 1420 ntBASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 AC008741.2-201ENST00000612792 3115 ntBASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 KLF2P3-201ENST00000451977 1087 ntBASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 AC125807.1-201ENST00000483097 614 ntBASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 AL133215.2-201ENST00000609242 977 ntBASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 AC093028.1-201ENST00000622998 982 ntBASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDGFL3Q9Y3E1 CETN4P-206ENST00000642099 2168 ntBASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 FO393414.2-201ENST00000405153 598 ntBASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms