Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 AC023157.3-201ENST00000619086 2088 ntBASIC14.36□□□□□ -0.11
COPS3Q9UNS2 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 AL122018.1-201ENST00000446607 2310 ntBASIC14.36□□□□□ -0.11
COPS3Q9UNS2 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.35□□□□□ -0.11
COPS3Q9UNS2 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 VN2R19P-201ENST00000442399 1052 ntBASIC14.35□□□□□ -0.11
COPS3Q9UNS2 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 KRT18P56-201ENST00000507275 550 ntBASIC14.35□□□□□ -0.11
COPS3Q9UNS2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 AL009183.1-201ENST00000603760 355 ntBASIC14.35□□□□□ -0.11
COPS3Q9UNS2 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.35□□□□□ -0.11
COPS3Q9UNS2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 AC006058.4-201ENST00000624016 1670 ntBASIC14.34□□□□□ -0.11
COPS3Q9UNS2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 AC098831.1-202ENST00000438821 336 ntBASIC14.34□□□□□ -0.11
COPS3Q9UNS2 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 AC109635.5-201ENST00000533593 962 ntBASIC14.34□□□□□ -0.11
COPS3Q9UNS2 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 AL691432.3-201ENST00000621860 400 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms