Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 GAPDHP40-201ENST00000505218 1006 ntBASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 BTNL10-201ENST00000595971 695 ntBASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 AC093813.1-201ENST00000605066 256 ntBASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 MIR6752-201ENST00000618442 71 ntBASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 AC112504.1-201ENST00000623415 1841 ntBASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 VDAC1P7-201ENST00000462417 847 ntBASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 AC009486.1-201ENST00000569860 813 ntBASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 AC233724.13-201ENST00000598383 410 ntBASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SYNPO2Q9UMS6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 DRD5P1-201ENST00000456605 1438 ntBASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 ACKR1-201ENST00000368121 1240 ntBASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 AC112492.5-201ENST00000421897 457 ntBASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 TMEM14DP-201ENST00000422205 345 ntBASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 IGHV3-71-201ENST00000523324 359 ntBASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 RAB43P1-201ENST00000561790 589 ntBASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPO2Q9UMS6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms